Gene Information

Name : glr2064 (glr2064)
Accession : NP_925010.1
Strain : Gloeobacter violaceus PCC 7421
Genome accession: NC_005125
Putative virulence/resistance : Virulence
Product : endopeptidase Clp ATP-binding chain
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 2215509 - 2217968 bp
Length : 2460 bp
Strand : +
Note : -

DNA sequence :
ATGTTTGAAAGATTTACCGAGAAAGCAATCAAAGTGATCATGTTGGCCCAGGAGGAAGCCCGTCGCCTGGGACACAACTT
TGTGGGTACCGAGCAAATCCTGCTCGGCCTCATCGGTGAGGGCACCGGCGTCGCCGCCAAGGTGCTCAAGTCCATGGGAG
TCAACCTGAAGGACGCCCGCATCGAGGTCGAAAAAATCATCGGCCGCGGCTCCGGGTTTGTGGCGGTCGAAATTCCGTTT
ACGCCCCGGGCCAAGCGGGTGCTGGAGCTGTCGCTCGAAGAAGCACGCCAACTTGGCCACAACTACATCGGCACCGAGCA
TTTGCTGCTGGGCCTCATCCGCGAGGGAGAAGGCGTCGCTGCCCGGGTGCTCGAGAATCTGGGAGTCGATCTGTCCAAGG
TCCGCACCCAGGTCATCCGCATGCTGGGAGAGACCGCCGAGGTCTCCGCCGGGGGCAACACCGGCCGCACCAAGACCCCG
ACCCTGGACGAGTTCGGCTCCAATCTCACCCAGATGGCCGCCGAGGGCAAACTCGACCCAGTGGTGGGCCGCGAAAAAGA
AATCGAACGGGTCATCCAGATCCTGGGTCGCCGCACCAAAAATAACCCCGTGCTCATCGGCGAACCGGGCGTGGGCAAGA
CGGCGATTGCCGAGGGCCTCGCCCAGCGCATCTCCAACAACGACATTCCCGACATCCTGGCCGACAAGCGCGTCGTCACC
CTCGACATTGGCTTGTTGGTAGCGGGCACCAAGTACCGCGGTGAATTCGAAGAGCGGCTCAAAAAGATCATGGACGAGAT
CCGTGCCGCCGGTAACGTCGTGCTGGTCATCGACGAGGTGCACACGCTCATCGGCGCCGGGGCTGCCGAGGGGGCCATCG
ACGCCGCCAACATCCTCAAGCCGGCCCTCGCGCGCGGCGAGCTGCAGTGCATCGGGGCGACCACCCTCGATGAGTACCGC
AAGCACATCGAGCGCGACGCCGCCCTCGAGCGCCGCTTCCAGCCGGTGATGGTGGGTGAGCCGACGGTCGATGAGACTAT
CGAGATCCTGCGCGGGTTGCGCGAGCGCTACGAGCAGCACCACAAGCTCAAGATCACCGATGAGGCGCTCATCGCCGCCG
CCCAGCTTTCCGATCGCTACATCTCCGATCGCTACTTGCCGGACAAGGCCATCGACCTGGTCGACGAGGCCGGTTCGCGC
GTGCGGTTGCTCTCCTCGCAACTGCCCCCGGCGGCCAAGGAACTCGACAAAGAACTGCGCCAGATTCTCAAAGAAAAGGA
CGACGCCGTGCGCGGCCAGGACTACGAGCGGGCGGGCGAGTTGCGCGACCGCGAGATGGAAATCAAATCCCAGATTCGCT
CGATTGCCCAGGCGCGCAAGTCCGAGACCGCCAACGAAGAGTCTCCCAACGTCACCGAAGAGGATATCGCCTACATCGTC
TCGAGTTGGACGGGGGTGCCGGTCAGCAAGCTCACCGAGTCTGAGACCGAGAAGCTCCTGCACATGGAAGACGTGCTCCA
CCAGCGCCTCATCGGTCAAGAAGAAGCAGTCAAGGCCATCTCCCGGGCCATCCGCCGGGCGCGCGTCGGCCTCAAAAATC
CGAAGCGGCCGATCGCGAGCTTCATCTTCAGCGGTCCCACCGGCGTCGGCAAGACCGAACTGGCCAAGTCGCTGGCGACC
TACTTCTTCGGCTCCGAGGATGCGATGATCCGCCTCGACATGTCCGAGTACATGGAGCGGCACACGGTGAGCAAGCTCAT
CGGTTCGCCCCCCGGCTACGTGGGCTACAACGAGGGCGGTCAGCTCACTGAGGCGGTGCGCCGCCGTCCCTACACGGTGA
TCCTCTTCGACGAAATCGAGAAGGCCCACCCGGACGTGTTCAACGTGCTGCTGCAGATCCTCGAGGACGGTCGCCTCACC
GATGCCAAGGGCCGCACGGTCGACTTCAAGAACACCTTGATGATCATGACCAGCAACGTCGGCTCCAAGGTGATCGAAAA
GGGCGGCGGCGGCCTCGGCTTCAACACCGCCGGCACCGAAGAGGAGCAGCGCTACAACCGCATCAGCGAACTGGTCAAAG
AAGAACTCAAGCAGTACTTCCGCCCCGAGTTCCTCAATCGCCTCGACGAGATCATTGTCTTCCACCCGCTGACGCGCGAG
GAAGTCAAGCAGATCGCCGTGATCATGCTGCGCGAGGTGTTCGCCCGCCTCGAAGAGCAGAACATGAAGATCGAGATTAC
CGACGCGTTCAACCGAAAGCTGATTGAAGAAGGCTACTCCGCCACCTACGGCGCCCGGCCGCTGCGCCGCGCCATCCAGC
GCATGCTCGAAGACCAGCTGGCCGAAGAAATTCTGGCCGCCCGCCTTAAAGAGGGCGACACGGTCTTGGTCGACGTCGAT
AGTGACGGCAAGCCGACCTTCATCGTCAAGGACCGCACCTTGGCCACCGCCGAAGGTTAA

Protein sequence :
MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFVAVEIPF
TPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGETAEVSAGGNTGRTKTP
TLDEFGSNLTQMAAEGKLDPVVGREKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRISNNDIPDILADKRVVT
LDIGLLVAGTKYRGEFEERLKKIMDEIRAAGNVVLVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYR
KHIERDAALERRFQPVMVGEPTVDETIEILRGLRERYEQHHKLKITDEALIAAAQLSDRYISDRYLPDKAIDLVDEAGSR
VRLLSSQLPPAAKELDKELRQILKEKDDAVRGQDYERAGELRDREMEIKSQIRSIAQARKSETANEESPNVTEEDIAYIV
SSWTGVPVSKLTESETEKLLHMEDVLHQRLIGQEEAVKAISRAIRRARVGLKNPKRPIASFIFSGPTGVGKTELAKSLAT
YFFGSEDAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVILFDEIEKAHPDVFNVLLQILEDGRLT
DAKGRTVDFKNTLMIMTSNVGSKVIEKGGGGLGFNTAGTEEEQRYNRISELVKEELKQYFRPEFLNRLDEIIVFHPLTRE
EVKQIAVIMLREVFARLEEQNMKIEITDAFNRKLIEEGYSATYGARPLRRAIQRMLEDQLAEEILAARLKEGDTVLVDVD
SDGKPTFIVKDRTLATAEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glr2064 NP_925010.1 endopeptidase Clp ATP-binding chain VFG0079 Protein 0.0 61
glr2064 NP_925010.1 endopeptidase Clp ATP-binding chain VFG0080 Protein 4e-153 53