Gene Information

Name : glr1273 (glr1273)
Accession : NP_924219.1
Strain : Gloeobacter violaceus PCC 7421
Genome accession: NC_005125
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1349439 - 1350164 bp
Length : 726 bp
Strand : +
Note : -

DNA sequence : 
ATGAACGCATCCCCACAGTCCCTTATTCGCCTCGACGGCGTGAGCAAAGTGTTTATGACCGACGAGGTCGAGACCCGTGC
CCTCTCACAGGTCGATCTCGAAATCCGTACAGGCGAATACGTCGCCATCGCCGGCCCTTCCGGCTGCGGCAAATCGACGC
TTCTGGCGATTTTGGGCCTGCTCGATTCGCCCAGCCAGGGCACCTATCTGTTGCGCGGCCAGACGGTGCAGAGTCTGGAC
CTGGTCGAACGCTCGCGCATCCGCAACCGCGAAATCGGATTTATTTTTCAGAGCTTCAACTTGATTGGCGATCTGACCGT
CGCCGAGAATGTCGAACTGCCGCTCACCTACCGGGGGCTGAGTGAGCCGGAGCGCAAAAAGCGGGTTACCCAGGCGCTCG
ACCGCGTCGAGATGTCCCACCGTCTGGGGCACTATCCGGCCCAACTGTCGGGCGGCCAGCAGCAGCGCGTCGCCGTGGCC
CGCGCCCTGGCCGGTTCGCCGGGCATTCTGCTGGCGGACGAGCCCACCGGCAACCTCGATTCGGCCAACGGCCAGGCGGT
GATGGATTTGCTGGGCGAGTTGCACCGGGGCGGGGCCACCATCTGCATGGTTACCCACGATCCGCGTTTCGCCGGTTATG
CCGAGCGCACCATCCACCTGCTCGACGGCCAGATCGTGCAGGCCGACGAAGCGTCGATGGCCAGATCGCGGGCGATGGGC
GGCTAG

Protein sequence : 
MNASPQSLIRLDGVSKVFMTDEVETRALSQVDLEIRTGEYVAIAGPSGCGKSTLLAILGLLDSPSQGTYLLRGQTVQSLD
LVERSRIRNREIGFIFQSFNLIGDLTVAENVELPLTYRGLSEPERKKRVTQALDRVEMSHRLGHYPAQLSGGQQQRVAVA
RALAGSPGILLADEPTGNLDSANGQAVMDLLGELHRGGATICMVTHDPRFAGYAERTIHLLDGQIVQADEASMARSRAMG
G

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-25 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-26 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-26 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-26 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glr1273 NP_924219.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-36 51
glr1273 NP_924219.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 7e-47 47
glr1273 NP_924219.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 5e-29 44
glr1273 NP_924219.1 ABC transporter ATP-binding protein NC_012469.1.7686946. Protein 9e-21 43
glr1273 NP_924219.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 4e-26 43
glr1273 NP_924219.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 8e-27 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glr1273 NP_924219.1 ABC transporter ATP-binding protein VFG2059 Protein 7e-12 42