Gene Information

Name : ribD (gvip175)
Accession : NP_924196.1
Strain : Gloeobacter violaceus PCC 7421
Genome accession: NC_005125
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : -
Position : 1328184 - 1329284 bp
Length : 1101 bp
Strand : -
Note : -

DNA sequence :
ATGGTAGCCGTGAGCGACGAAGACTGGATGGAGCGCTGCCTCGCCCTCGCCGAGCAAGCCTGGGGCCGTACGACGCCCAA
TCCGCTGGTGGGGGCGGTGGTGGTCAACGATGGGCTGGCCGTGGGTGAAGGCTTTCACCCGAAGGCGGGTGCACCCCACG
CGGAGGCCTTTGCCCTGCGGGCCGCCGGGGATTTGGCCCGAGGTGCCACGCTCTACGTCAATCTGGAACCCTGCAACCAC
CACGGCCGCACCCCGCCCTGCACCGAAGCAATTGTCGCAGCGGGCCTGCAGCGCGTGGTGATCGGTATGGTCGATCCGAA
TCCAATCGTTTCCGGCCGCGGCCTCGAGCGACTGCGCACCGCCGGAATCGAAGTGAGCGTCGGGGTACTCTCCGATCGCT
GCGAGCGGCTCAACGAGGCTTTTTCGCACTTCATGCGCACCGGGCGGCCCTTCGGGGTGCTCAAGTACGCCATGACCCTG
GACGGCAAGACCGCCACGCGCACCGGCCACAGCTTCTGGATCAGCGGCCAGGCGGCCCGCGCCCGTACCCACCGTCTGCG
CGCCTTCGCCGACGCGGTGATCGTGGGGGGCAACACCGTGCGTTTGGATGATCCGCAACTCACCGTCCGCCTGGCTGAGG
GCCGCAACCCGTTGCGCGTCGTTCTCTCTCGCACCCTGGCCTTGCCGGCCGAGGCGCGGCTGTGGCTGGATCAAACACCC
TCCCCCACCCTGGTCTTCACCGGAGCGCAGGGCGACCCCCAGATGCGTTCCCACCTGGAGCGGCTGGGTGTGGAAGTGCA
AGTGTTGGACGAACTCACCCCCGCCGCCGTGCTCGAAAAACTCGCTTCTTACCCCTGCGTGTCGGTGCTCTGGGAGTGCG
GCGGCACCCTCGCCTGGTCGGCTCTGACGGACGGGTCGGTGCAGAAGGTGATTTGCTTCGTCGCTCCCTGCCTGGTGGGC
GGAGCGCAGGCCTACACGCCTGTCGCCGGTGAGGGCTTCGCCAAGATGCACGCAGCGATGCGTCTGGAGCGGGTACACGC
CGAGCCCGTCGGCGAAGATTGGATGTGGAGCGGTTATCTGCAATTCAACCCAAGAAATTAA

Protein sequence :
MVAVSDEDWMERCLALAEQAWGRTTPNPLVGAVVVNDGLAVGEGFHPKAGAPHAEAFALRAAGDLARGATLYVNLEPCNH
HGRTPPCTEAIVAAGLQRVVIGMVDPNPIVSGRGLERLRTAGIEVSVGVLSDRCERLNEAFSHFMRTGRPFGVLKYAMTL
DGKTATRTGHSFWISGQAARARTHRLRAFADAVIVGGNTVRLDDPQLTVRLAEGRNPLRVVLSRTLALPAEARLWLDQTP
SPTLVFTGAQGDPQMRSHLERLGVEVQVLDELTPAAVLEKLASYPCVSVLWECGGTLAWSALTDGSVQKVICFVAPCLVG
GAQAYTPVAGEGFAKMHAAMRLERVHAEPVGEDWMWSGYLQFNPRN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 9e-42 42
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 9e-42 42