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Name : SERS (WS0872) Accession : NP_907081.1 Strain : Wolinella succinogenes DSM 1740 Genome accession: NC_005090 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 827818 - 829104 bp Length : 1287 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGATTGATTTGAAGCTTTTGATGAATGATTTTGAAGAGGTGGCAGAGAGGCTGGCCAAGCGCCATTTGGAGGCTGATTT TTTGGAGCAGGCGCGCCTTTTGGCGGGTCAATACAAGGCGAAAAAGCGCGAGAGCGAAGAGTTGCAAGCCGAGCAAAACG CCAAGTCTAAACTCTTTGGCCAATACAAAAAAGAGGGAAAAGAGATCGACTCCCTCAAAGCAGAGCTAGACACCCTCAAG ATTCGTTTGAGTGAGATTCTCCCTGAGGTGAGTGTTTTAGAGAGAGAGCTAGAATCGCTTGCACTCATTATTCCCAACCT GCCTGATGAGAAGACCCCCATAGGAAGAGATGAGCATGACAATATTGAAATTAGGCGCGTGCTAGAGCCTAAGATGTTCG ACTTCCGCCCCAAAGAGCATTGGGAGTTGGCCGAGCAGAATGGTTGGATTGAGTTTGATCGTGGCGTGAAGCTGGCCAAG AGCCGATTTTCGGTGTTGCGCAAAGAGGGAGCGAGAATGAGCCGAGCGCTCATTAGCTATATGCTTGATTTTAATCACTC TAGAGGCTTTGAAGAGGTGGTTACGCCCGTGATCGTTAATAGAGAAACGCTCCTTGGAACGGGGCAGTTGCCTAAGTTTG AAAATGATCTTTTTAAAATCTCTGAAGTGATTGAAGAGGAGCAGGGGGGCGAGAAGGGAAGGGGGCATGAACTCTATTTG ATTCCCACGGCCGAAGTGACACTCACCAATCTCTATCGAGATGAGATTATTCCCCACGATGAACTTCCCCTCCTGCTCAC GGCGCACACGCCATGTTTTCGCAAAGAGGCAGGAAGCGCAGGGCGTGACACAAGAGGGATTATTCGCCAGCATCAGTTTG ACAAAGTGGAGCTAGTGGCACTCACAAAGCCCGAAGAGAGTGATGCGATTCAGCAAAAGATGATCGATTGCGCCTCTGAC CTTTTGAGCTCTCTAGGATTGCCTCATCGCTTAGTCCAGCTCTGCGGAGGGGATCTTGGGTTTGGAGCGAGCAACACGGT GGATATTGAGGTTTGGCTTCCGGGGCAAAACTGCTATCGTGAGATCAGCTCCATCTCCAATACAAGAGATTTTCAAGCTA GACGCGCCATGATTCGCTATAAAGACGAGGATAAAAAAAATCGACTCGTCCACACTCTCAATGGATCCTCTTTGGCGGTA GGCAGAACACTGGTAGCCATCATGGAAAACTACCAAAACGCCGATGGAACCATCGAGATTCCTGAGGTTTTACGCCGCTA CCTATGA Protein sequence : MIDLKLLMNDFEEVAERLAKRHLEADFLEQARLLAGQYKAKKRESEELQAEQNAKSKLFGQYKKEGKEIDSLKAELDTLK IRLSEILPEVSVLERELESLALIIPNLPDEKTPIGRDEHDNIEIRRVLEPKMFDFRPKEHWELAEQNGWIEFDRGVKLAK SRFSVLRKEGARMSRALISYMLDFNHSRGFEEVVTPVIVNRETLLGTGQLPKFENDLFKISEVIEEEQGGEKGRGHELYL IPTAEVTLTNLYRDEIIPHDELPLLLTAHTPCFRKEAGSAGRDTRGIIRQHQFDKVELVALTKPEESDAIQQKMIDCASD LLSSLGLPHRLVQLCGGDLGFGASNTVDIEVWLPGQNCYREISSISNTRDFQARRAMIRYKDEDKKNRLVHTLNGSSLAV GRTLVAIMENYQNADGTIEIPEVLRRYL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 5e-86 | 48 |
