Gene Information

Name : WS0641 (WS0641)
Accession : NP_906872.1
Strain : Wolinella succinogenes DSM 1740
Genome accession: NC_005090
Putative virulence/resistance : Virulence
Product : transcriptional activator protein COPR
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 625287 - 625961 bp
Length : 675 bp
Strand : -
Note : -

DNA sequence : 
GTGAAGATTTTGCTCGTTGAAGACGATTTGGACCTCTCCTTGGTTCTCAAAAAAGCTCTACAAAAAGAACTCTACACCAT
TGATATTGCCCCATGTCTAGCGGATGCTTCTCATCTCTTAACCCATTTTCGCTACGATCTTATTCTTCTTGACTTAATGC
TTCCCGATGGCAATGGGATCACCTTTTGCCAAAAACTCCGAGCACGTGGAGAGGGAATCCCTCTGATTATACTCACAGCC
AAAGACACGATTATGGATCGTGTCTTTGGCTTGGATAGTGGCGCAGATGACTATTTGGCCAAGCCCTTCTCACTGGCTGA
ACTCATGGCAAGAATTCGAGCCAGGCTACGCAATCCAATAACTCCAGAAAATCCTCTGGCATTAAAGATTGCCGATTTAG
AAATAGACCAACGCACTAAAAAGGTAACCCGCGGAGGCAAGCTCATTCTCTTGACCCCCAAAGAGTATCGCCTCTTGGAA
TTTCTTGCTCTTAATCAAGACGCGACTCTCTCCGAAGAGATTATCAAAGAGGCTTTACTAGATTTTGAAGAACAAACCCT
GAGCAATGTTATAAGCGTCTATATTTACCGCCTTAGGAACAAAATCGACAAAGATCATTCCGTTAAGTTAATTCACACTC
TTCGAGGAATCGGTTATCGATTTGGATACCTTTGA

Protein sequence : 
MKILLVEDDLDLSLVLKKALQKELYTIDIAPCLADASHLLTHFRYDLILLDLMLPDGNGITFCQKLRARGEGIPLIILTA
KDTIMDRVFGLDSGADDYLAKPFSLAELMARIRARLRNPITPENPLALKIADLEIDQRTKKVTRGGKLILLTPKEYRLLE
FLALNQDATLSEEIIKEALLDFEEQTLSNVISVYIYRLRNKIDKDHSVKLIHTLRGIGYRFGYL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-26 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 3e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
WS0641 NP_906872.1 transcriptional activator protein COPR BAC0083 Protein 6e-33 48
WS0641 NP_906872.1 transcriptional activator protein COPR BAC0638 Protein 9e-28 47
WS0641 NP_906872.1 transcriptional activator protein COPR BAC0347 Protein 1e-31 46
WS0641 NP_906872.1 transcriptional activator protein COPR BAC0197 Protein 9e-31 46
WS0641 NP_906872.1 transcriptional activator protein COPR BAC0111 Protein 4e-32 45
WS0641 NP_906872.1 transcriptional activator protein COPR NC_013450.8614146.p0 Protein 8e-28 45
WS0641 NP_906872.1 transcriptional activator protein COPR NC_002951.3238224.p0 Protein 8e-28 45
WS0641 NP_906872.1 transcriptional activator protein COPR NC_007793.3914065.p0 Protein 8e-28 45
WS0641 NP_906872.1 transcriptional activator protein COPR NC_002758.1121390.p0 Protein 8e-28 45
WS0641 NP_906872.1 transcriptional activator protein COPR NC_010079.5776364.p0 Protein 8e-28 45
WS0641 NP_906872.1 transcriptional activator protein COPR NC_002952.2859858.p0 Protein 8e-28 45
WS0641 NP_906872.1 transcriptional activator protein COPR NC_007622.3794948.p0 Protein 8e-28 45
WS0641 NP_906872.1 transcriptional activator protein COPR NC_003923.1003417.p0 Protein 8e-28 45
WS0641 NP_906872.1 transcriptional activator protein COPR BAC0308 Protein 6e-28 45
WS0641 NP_906872.1 transcriptional activator protein COPR BAC0125 Protein 6e-29 44
WS0641 NP_906872.1 transcriptional activator protein COPR AE015929.1.gene1106. Protein 6e-22 43
WS0641 NP_906872.1 transcriptional activator protein COPR AE000516.2.gene3505. Protein 6e-26 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
WS0641 NP_906872.1 transcriptional activator protein COPR VFG0596 Protein 4e-27 42
WS0641 NP_906872.1 transcriptional activator protein COPR VFG1390 Protein 7e-34 41