Gene Information

Name : fliQ (WS1489)
Accession : NP_907642.1
Strain : Wolinella succinogenes DSM 1740
Genome accession: NC_005090
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliQ
Function : -
COG functional category : N : Cell motility
COG ID : COG1987
EC number : -
Position : 1426497 - 1426763 bp
Length : 267 bp
Strand : -
Note : with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus

DNA sequence : 
ATGGAAGCGAAACTGATGGCTTTGGCGATTGAGACCTATAAAATCACGCTGATTCTCTCGCTTCCAATGCTGATGGCGGG
CTTGGTGGTGGGACTTTTGATCAGTATTTTTCAAGCCACCACACAGATCAACGAACAGACCCTCACCTTTGTTCCTAAGA
TTCTTGTGGTGATTGTGGTGGTGATCCTCACGATGCCATGGATGATGAATATGCTCATCGACTTCACCACGCGCCTTATT
AAGATGATCCCCGATTTTCCCTTTTAG

Protein sequence : 
MEAKLMALAIETYKITLILSLPMLMAGLVVGLLISIFQATTQINEQTLTFVPKILVVIVVVILTMPWMMNMLIDFTTRLI
KMIPDFPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
escS YP_003223489.1 T3SS structure protein EscS Virulence LEE Protein 5e-07 43
escS CAC81848.1 EscS protein Virulence LEE II Protein 3e-07 43
escS YP_003232139.1 T3SS structure protein EscS Virulence LEE Protein 5e-07 43
escS AAK26701.1 EscS Virulence LEE Protein 3e-07 43
escS AAL57528.1 EscS Virulence LEE Protein 3e-07 43
unnamed AAL06355.1 EscS Virulence LEE Protein 2e-07 42
escS CAI43888.1 EscS protein Virulence LEE Protein 8e-07 42
escS AAC38370.1 EscS Virulence LEE Protein 3e-08 41
escS YP_003236102.1 T3SS structure protein EscS Virulence LEE Protein 5e-08 41
escS AAC31527.1 L0048 Virulence LEE Protein 3e-08 41
escS NP_290282.1 hypothetical protein Virulence LEE Protein 5e-08 41
escS ACU09472.1 hypothetical protein Not tested LEE Protein 3e-08 41
ECs4582 NP_312609.1 EscS Virulence LEE Protein 5e-08 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliQ NP_907642.1 flagellar biosynthesis protein FliQ VFG2339 Protein 2e-07 45
fliQ NP_907642.1 flagellar biosynthesis protein FliQ VFG0826 Protein 1e-08 41
fliQ NP_907642.1 flagellar biosynthesis protein FliQ VFG0716 Protein 1e-08 41