|
Name : CV_0819 (CV_0819) Accession : NP_900489.1 Strain : Chromobacterium violaceum ATCC 12472 Genome accession: NC_005085 Putative virulence/resistance : Virulence Product : nucleotide sugar epimerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0451 EC number : 5.1.3.- Position : 845370 - 846341 bp Length : 972 bp Strand : + Note : identified by sequence similarity; ORF located using Blastx/COG0451 DNA sequence : ATGACAAAGATTCTGGTGACCGGCGCCGCCGGTTTTATTGGTCGGGCAGTATGCGAGAAGCTGCTGGAGCGGCGAGATGT TCAGGTTGTCGGAATCGATAATCTGAATGACTACTACGCGGTCGAGCTCAAGCATGCCAGGCTGGCGACTCTGCAGGGAC GGTCCAATTTCAGTTTTCATCGGCAGGACATCGCGGACTGGCCTGCGATGGAACGCTTGTTCTCGGCTGAAAAATTCGAT TATGTCATTCATCTGGCAGCCCAGGCCGGGGTGCGTTATTCGCTGCAGAATCCCCATGCTTATGCGGAAAGCAATTTGTT GGGCTTTACCAATGTACTGGAGGCCTGCCGTCGCCATCCAGTCAAGCACTTGGTTTTTGCCGGATCATCCAGTGTTTACG GAAGCGGTTCGGCTGTGCCGTTTTCGGAGGATCAGCGAGCCGATCATCCGGTCAGCTTTTATGCTGCCACCAAACGCGCG AACGAGTTGATGGCCGCCAGCTATTCTCATTTGTATCGACTGCCTACGACCAGCTTGCGTTTCTTTACGGTCTATGGCCC ATGGGGGCGGCCGGACATGGCTCCTTGGCTGTTTACCGATGCCATTCTGAACGGTCGGCCGATCAAGGTGTTCAATCACG GAAAGATGCAGCGTGACTTCACCTATATCGACGATATCGTTGAGGGGGTGGTGCGGGTGATGGAGCACGTTCCGTCCGGC GAGTTGCCGCATACGATTTTCAATATCGGCAATCACCAGCCGGTGGAGCTGATGACCTTCATCCAACTGACCGAGAAATA TTGCGGCAGAGAGGCAATCAAGGAGTACCTGCCCATGCAGGATGGTGATGTGCCGATCACTTACGCCGAAACATCTCGTT TGAGAGATGCGGTGGGTTTCACGCCATCCACTTCGCTTGAGGTTGGTATGGCCCGTTTTGTCGAATGGTTCAGGAATTAT CATGCGGTTTGA Protein sequence : MTKILVTGAAGFIGRAVCEKLLERRDVQVVGIDNLNDYYAVELKHARLATLQGRSNFSFHRQDIADWPAMERLFSAEKFD YVIHLAAQAGVRYSLQNPHAYAESNLLGFTNVLEACRRHPVKHLVFAGSSSVYGSGSAVPFSEDQRADHPVSFYAATKRA NELMAASYSHLYRLPTTSLRFFTVYGPWGRPDMAPWLFTDAILNGRPIKVFNHGKMQRDFTYIDDIVEGVVRVMEHVPSG ELPHTIFNIGNHQPVELMTFIQLTEKYCGREAIKEYLPMQDGDVPITYAETSRLRDAVGFTPSTSLEVGMARFVEWFRNY HAV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1I | AAA64648.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-74 | 48 |
