Gene Information

Name : CV_0648 (CV_0648)
Accession : NP_900318.1
Strain : Chromobacterium violaceum ATCC 12472
Genome accession: NC_005085
Putative virulence/resistance : Virulence
Product : prophage regulatory protein
Function : -
COG functional category : K : Transcription
COG ID : COG3311
EC number : -
Position : 678312 - 678530 bp
Length : 219 bp
Strand : -
Note : identified by sequence similarity; ORF located using Glimmer/GeneMark/Blastx/COG3311

DNA sequence : 
ATGACCGCTAATGCCCCTTCGCTCACCGCCCAGCCGCTGCGCTTTCTGCGCTTGCCGGAAGTCATCTCTACGTGCGGCCT
GTCCCGCTCGTCGGTGTACGACGCCATCAAGCGCGGCAGCTTTCCGGCCCCGGTGCCGCTGGGCGGTAAAAGCGTGGCCT
GGCTGTCGTCTGAAATCGATGTCTGGATGGCTGGACGCATCGCGGCGCGCCACGCCTAA

Protein sequence : 
MTANAPSLTAQPLRFLRLPEVISTCGLSRSSVYDAIKRGSFPAPVPLGGKSVAWLSSEIDVWMAGRIAARHA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0497 NP_230151.1 transcriptional regulator Not tested VSP-2 Protein 7e-12 48
PMI2608 YP_002152324.1 prophage regulatory protein Not tested Not named Protein 7e-07 46
unnamed CAB46594.1 DNA-binding protein Not tested HPI Protein 1e-08 44
unnamed CAA21398.1 - Not tested HPI Protein 1e-08 44
VPI2_0033 AAX20900.1 transcriptional regulator Not tested VPI-2 Protein 4e-12 42
VC1785 NP_231420.1 transcriptional regulator Not tested VPI-2 Protein 6e-12 42
VC0395_A1382 YP_001217325.1 transcriptional regulator Not tested VPI-2 Protein 6e-12 42
VC1809 NP_231443.1 transcriptional regulator Not tested VPI-2 Protein 5e-11 42
VC0395_A1406 YP_001217349.1 transcriptional regulator Not tested VPI-2 Protein 5e-11 42
VPI2_0041 ACA01856.1 predicted transcriptional regulator Not tested VPI-2 Protein 2e-11 41
unnamed CAE85187.1 hypothetical protein Not tested PAI V 536 Protein 8e-06 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CV_0648 NP_900318.1 prophage regulatory protein VFG1118 Protein 2e-12 42
CV_0648 NP_900318.1 prophage regulatory protein VFG1141 Protein 1e-11 42