Gene Information

Name : hemC (CV_0054)
Accession : NP_899724.2
Strain : Chromobacterium violaceum ATCC 12472
Genome accession: NC_005085
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 59809 - 60738 bp
Length : 930 bp
Strand : -
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis

DNA sequence :
ATGGACAAGATCGTCATCGCCAGCCGCGAAAGCCGGCTGGCCATGTGGCAGGCCGAGCACATCCAGGCCCGGCTGCAAGC
GTTGTACCCGCACCTGACTGTGGAAATCCTGGGCATGACCACCCAGGGCGACCAGATCCTGGACAAGACGCTGTCCAAGA
TCGGCGGCAAGGGCCTGTTCGTCAAGGAGCTGGAACAGGCGCTGATGGACGGCCGAGCCGACTTGGCCGTGCATTCGCTG
AAGGACGTGCCGATGACGCTGCCGGACGGCTTCGCGCTGGCCGCGGTGTGCGAGCGCGAGGACCCGCGCGACGCCTTCGT
CTCCAACCGCTACCAGCATCTTTCCGAGCTGCCGGCAGGCAGCGTGGTGGGCACCTCCAGCCTGCGGCGCGAGGCCCAGC
TGCGCGCCCGTTTCCCGCAGCTGGCGGTGAAACCCCTGCGCGGCAATGTGCAGACCCGGCTGAAGAAGCTGGACGACGGC
GAATTCGACGCCATCATCCTGGCCGCCGCCGGCCTGAAGCGTCTGGGCCTGGCCGAGCGCATCCAGGGCGAGCTTGCGCC
GTCGGAAAGCCTGCCGGCCGCCGGACAGGGCGCGCTGGGCATCGAGATCCGCGCCGATCGCGCCGACCTGTCGGCGCTGC
TGGCGCCGCTGAACCATCCGGACACCCGCGCCTGTACCGCCGCCGAGCGCGCGCTGGCCAAGGAGCTGGGCGGCAGCTGC
CAGGTGCCGCTGGGCGCCTTCGCCACGCTGGCCGACGGCACGTTGACGTTGGGCGGCCTGGTCGCCCATCCGGACGGCTC
GGTGGTGCTGACCGCCAGCGCCAGCGGCCCGGCCGATTACGCCGACGCGCTCGGACGCGCGGTGGCGAAAAAGCTGATCG
ACGCCGGCGCGCGGCCGCTGATCGCCGCGGTGCTGGCCGAACCGCGCTGA

Protein sequence :
MDKIVIASRESRLAMWQAEHIQARLQALYPHLTVEILGMTTQGDQILDKTLSKIGGKGLFVKELEQALMDGRADLAVHSL
KDVPMTLPDGFALAAVCEREDPRDAFVSNRYQHLSELPAGSVVGTSSLRREAQLRARFPQLAVKPLRGNVQTRLKKLDDG
EFDAIILAAAGLKRLGLAERIQGELAPSESLPAAGQGALGIEIRADRADLSALLAPLNHPDTRACTAAERALAKELGGSC
QVPLGAFATLADGTLTLGGLVAHPDGSVVLTASASGPADYADALGRAVAKKLIDAGARPLIAAVLAEPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 1e-61 59
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 1e-61 59