Gene Information

Name : CV_3979 (CV_3979)
Accession : NP_903649.1
Strain : Chromobacterium violaceum ATCC 12472
Genome accession: NC_005085
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3516
EC number : -
Position : 4303153 - 4303659 bp
Length : 507 bp
Strand : -
Note : identified by sequence similarity; ORF located using Glimmer/GeneMark/Blastx/COG3516

DNA sequence : 
ATGGGCAAGGAAAGCACTCAGAAAAAACTGTCGAGGGTCCGTCCGCCGCGCGTGCAGATCACCTATGACGTCGAGATCGG
CGACGCGATCGAAACCAAGGAGCTGCCGTTCGTGCTGGGCGTGCTGGGCGATTATTCCGGCCACAGCAAGGAGCCGCTGC
CGAAGATGAAGGAGCGCAAGTTCGTCCAGATCGACCGCGACAACTTCGACGAGGTGCTGAAGGGCATGGCGCCGCGCCTG
GCGATGAAGGTGGACAACGCGCTGAAGGACGACGGCACCCAGCTGGGCGTGGAATTGAATTTCGAGAGCCTGTCGGATTT
CGAGCCGCAGAACGTGGTTCGCCAGATCGACCCGTTGAACCAGCTGCTGGAGGCCCGCACCCGCCTGGCCGATCTGCGCA
ATAAGCTGGCCGGCAACGACAAGCTCGAAGAGCTGCTGGACGAAGTGGTGCGCGATACCGAGAAGCTGCGCCAGATCGGC
GGCAAGAAAGAAGGAGGCGAGCAGTGA

Protein sequence : 
MGKESTQKKLSRVRPPRVQITYDVEIGDAIETKELPFVLGVLGDYSGHSKEPLPKMKERKFVQIDRDNFDEVLKGMAPRL
AMKVDNALKDDGTQLGVELNFESLSDFEPQNVVRQIDPLNQLLEARTRLADLRNKLAGNDKLEELLDEVVRDTEKLRQIG
GKKEGGEQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0297 NP_454879.1 conserved hypothetical protein Not tested SPI-6 Protein 5e-31 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CV_3979 NP_903649.1 hypothetical protein VFG2069 Protein 5e-30 44