|
Name : CV_3965 (CV_3965) Accession : NP_903635.1 Strain : Chromobacterium violaceum ATCC 12472 Genome accession: NC_005085 Putative virulence/resistance : Virulence Product : ClpA/B-type chaperone Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : 3.4.21.92 Position : 4286490 - 4289117 bp Length : 2628 bp Strand : - Note : identified by sequence similarity; ORF located using Blastx/COG0542 DNA sequence : CTGAAATCCCTGATAGACCGGTTGACGCCCACCGCGCGCCAGGCCATCGAGCAGGCCGCCAGCCGCGCGCTGGCCCGCAC CCACTTCGAGATCGAGATCGAGCATGTGCTGCTGGCGATGTTCGATCAGGACGACAATGCCGCGCTGGCGGCGCTGCGCG CGCTGGGCGCGGACCTGGGCCGCGTCGAGCGCGAGCTGGACGCCGCGCTGGACAACTTCCGCAGCGGCAATACCCGCAAT CCGGTGCTGTCGTCGTGGCTGCCCAAGTGGCTGGAAAAGGCCTGGCTGCTGGCCAGCGCCGAGCACGGCCAGGACAGTGT CTCCACGTTGGACTTGCTGCTGGCGCTGTGGCAGGACGACGCCCTGCGCGGCGCGCTGCAGTCCGGCGCGCCGGCATTGG CGCGCCAGGATGCCGGCAGGCTGTCCGGCGCCTACGCCGCGCTGCGCCAGCACGGCGGCGAGGCGGCGGGCGGCGAGCAG CCGTCGGCCGCGGCAGACGAGGGCGAAGGCGAGGCGCCGGCCGCGCCGCAGGGCAAGCGCGGCGGCGCCGCGCTGGACAA GTACACGATAGACCTGACCGCGCAGGCCAAGGCCGGCAAGATCGACCCCATCCTGGGCCGCGATGTCGAAATCCGCCAGA TGATAGACATCCTGATGCGCCGCCGGCAGAACAATCCCATCCTCACCGGCGAGCCGGGCGTGGGCAAGACCGCGGTGGTG GAAGGCTTGGCGCGCAAGATCGTGCTGGGCGAGGTGCCGCCGGTGCTGTCCGGCGTCACGCTGCGCACGCTGGACCTGGG CCTGCTGCAGGCCGGCGCCAGCGTCAAGGGCGAGTTCGAGAACCGCCTGCGCCAGGTGATAGACGAGGTCAAGGCCAGCC CGGTGCCCATCATCCTGTTCATCGACGAGGCGCACACCCTGATCGGCGCCGGCGGCGCGGCCGGCCAGAACGACGCGGCC AACCTGCTGAAACCGGCGCTGGCGCGCGGCGAGCTGCGCACCATCGCGGCGACGACCTGGGCCGAGTACAAGAAGTATTT CGAGAAGGACGCCGCGCTGGCGCGCCGCTTCCAGGTGGTGAAGGTCGAAGAGCCGGCGCCGGAAATCGCCGTGCAGATGG TGCGCGGCCTGACCGACGCGATGGCCAAGCACCACAAGGTGGAAATCCTCAACGAGGCGGTGGCCGCCGCAGTGCAGCTG TCCAGCCGCTACATCGCCGGCCGCCAGCTGCCGGACAAGGCGATCAGCGTGCTCGACACCGCTTGCGCCCGCGTCGCGCT GTCGCGCGCCGGCAAGCCGGGGCCGATCGAGGACGTGACGGTGCTGATAGACAACATCGACCGCGAAACCGCCGCGCTGG AGCGCGAGGAAGGCCACGCCGAGCGCATCGCCGAGCTGCAGGCGCAGCGCGCCAAGCTGGAGCAGGATCTGGCCGCGCTG CATCAGGCCTGGGAGGCGCAGCAGAAGCTGATCGAAGAGATAGACGAGCTGAAGGCGGCCAAGGACGAGGCCAAGCCGGC CAAGGGCAGGAAGCTCAGCCCGCTGCAGGCCAAGCGCAAGGAATTGCGCGAGTTGCAGAAGCATCAGCCGCTGGCGTTCG AATGCGTGGACGAGAGCGTGATCGCCGACGTGATCGCCGGCTGGACCGGCATCCCGCTGGGCCGCATGGTCAGCAACGAG CTGGAGCAGGTGCAGAAGCTGGCCAAGCTGCTGGCCGAGCGCGTGATCGGCCAGGACCACGCGTTGGAGCAGATCGCCGA GCGGGTGCAGATCGCCAAGGCCAATCTGGAAGATCCCGGCAAGCCCAAGGGCGTATTCCTGCTGGTGGGCCCGTCCGGCG TCGGCAAGACCGAGACCGCGCTGGCGCTGGCCGAGGCGCTGTACGGCGGCGAGCGCAATCTGATCACCATCAACATGTCC GAATACCAGGAAGCGCACAGCGTGTCCGGCCTGAAGGGCTCGCCCCCGGGTTATGTCGGCTACGGCGAGGGCGGCGTGCT GACCGAGGCGGTGCGCCGCAAGCCGTACTCCGTCGTGCTGCTGGATGAAGTGGAGAAGGCGCACCCGGACGTGCTGGAGC TGTTCTTTCAGGTATTCGACAAGGGCGTGCTGGAGGATAGCGAAGGCCGCGAGGTGGACTTCAAGAACACCATCATCCTG CTGACGTCCAACGCCGGCACCGATCTGGTGATGCGCGCCTGCGAGCACGGCGTGACGGTGGAGGACGAGACCCGCGACCC GACCGCGGAAGACCTGGTGGAAATCCTGCGCCCGACGCTGCAGAAGACCTTCAAGCCGGCTTTCCTCGGCCGCCTGACCA TCGTGCCTTACTTCCCGATCAGCGACGACGTGCTGCGCGCCATCGTCGGCCTGAAGCTGGACAAGATCCGCCGCCGCATC GCCGACAACCACGGCGCCCAGGTCGAGTTCCCGGAAGAACTGGCCGATCAGATGGCCGCGCGCTGCCTGGACGTGGACAG CGGCGCGCGCAACGCCGACGCCATCCTCACCCGCACGCTGCTGGCGCAGATCTCCAACGACCTGCTGTCGCGTATGGCCA GCGGCAAACCGGTGAAGAAGATCGCCGTCGCGCTGAAGGGCGAGCAGGTCAAGGTGAAGGTGAGTTAA Protein sequence : MKSLIDRLTPTARQAIEQAASRALARTHFEIEIEHVLLAMFDQDDNAALAALRALGADLGRVERELDAALDNFRSGNTRN PVLSSWLPKWLEKAWLLASAEHGQDSVSTLDLLLALWQDDALRGALQSGAPALARQDAGRLSGAYAALRQHGGEAAGGEQ PSAAADEGEGEAPAAPQGKRGGAALDKYTIDLTAQAKAGKIDPILGRDVEIRQMIDILMRRRQNNPILTGEPGVGKTAVV EGLARKIVLGEVPPVLSGVTLRTLDLGLLQAGASVKGEFENRLRQVIDEVKASPVPIILFIDEAHTLIGAGGAAGQNDAA NLLKPALARGELRTIAATTWAEYKKYFEKDAALARRFQVVKVEEPAPEIAVQMVRGLTDAMAKHHKVEILNEAVAAAVQL SSRYIAGRQLPDKAISVLDTACARVALSRAGKPGPIEDVTVLIDNIDRETAALEREEGHAERIAELQAQRAKLEQDLAAL HQAWEAQQKLIEEIDELKAAKDEAKPAKGRKLSPLQAKRKELRELQKHQPLAFECVDESVIADVIAGWTGIPLGRMVSNE LEQVQKLAKLLAERVIGQDHALEQIAERVQIAKANLEDPGKPKGVFLLVGPSGVGKTETALALAEALYGGERNLITINMS EYQEAHSVSGLKGSPPGYVGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVLELFFQVFDKGVLEDSEGREVDFKNTIIL LTSNAGTDLVMRACEHGVTVEDETRDPTAEDLVEILRPTLQKTFKPAFLGRLTIVPYFPISDDVLRAIVGLKLDKIRRRI ADNHGAQVEFPEELADQMAARCLDVDSGARNADAILTRTLLAQISNDLLSRMASGKPVKKIAVALKGEQVKVKVS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 4e-154 | 51 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 1e-132 | 43 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 9e-133 | 43 |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 3e-96 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CV_3965 | NP_903635.1 | ClpA/B-type chaperone | VFG2076 | Protein | 2e-177 | 52 |
| CV_3965 | NP_903635.1 | ClpA/B-type chaperone | VFG2084 | Protein | 7e-141 | 44 |
| CV_3965 | NP_903635.1 | ClpA/B-type chaperone | VFG0079 | Protein | 4e-103 | 43 |
