Gene Information

Name : hofG (CV_3811)
Accession : NP_903481.1
Strain : Chromobacterium violaceum ATCC 12472
Genome accession: NC_005085
Putative virulence/resistance : Virulence
Product : general secretion pathway protein G
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 4108557 - 4109000 bp
Length : 444 bp
Strand : -
Note : identified by sequence similarity; ORF located using Glimmer/GeneMark/Blastx/COG2165/TC:3.A.15.1.1

DNA sequence : 
ATGAAACAGCTCAAACGCGCCGCCCAACGCGGCTTTACCCTGATCGAGATCATGGTGGTGATCGTCATCCTCGGCGTGCT
GGCCGCGCTGGTGGTGCCCAAGGTGATGAGCCGCCCGGACGAGGCGCGCATCGTCGCCGCCAAGCAGGACATCGGCGCGA
TCAGCCAGGCGCTGAAGCTGTACCGGCTGGACAACGGCCGCTATCCGAGCACCGACCAGGGCCTGTCGGCGCTGGTGCAG
AAGCCGACCGCCGCGCCGGAGCCTAAGAACTGGAAACCGGGCGGCTACCTGGAGCGCCTGCCGAAGGATCCGTGGGGCAA
CGCCTATCAATACGCCAACCCGGGCACTCACGGCGAAATCGACATCTGGAGCTTCGGCGCCGACGGCGAGCCGGGCGGCG
AGGGCAACGACGCCGACATCGGCAACTGGGACAGCGGCAAGTAA

Protein sequence : 
MKQLKRAAQRGFTLIEIMVVIVILGVLAALVVPKVMSRPDEARIVAAKQDIGAISQALKLYRLDNGRYPSTDQGLSALVQ
KPTAAPEPKNWKPGGYLERLPKDPWGNAYQYANPGTHGEIDIWSFGADGEPGGEGNDADIGNWDSGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 3e-27 55
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 2e-27 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hofG NP_903481.1 general secretion pathway protein G VFG0180 Protein 9e-33 66
hofG NP_903481.1 general secretion pathway protein G VFG1871 Protein 1e-33 66
hofG NP_903481.1 general secretion pathway protein G VFG2050 Protein 8e-28 55