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Name : xerD (CV_3670) Accession : NP_903340.1 Strain : Chromobacterium violaceum ATCC 12472 Genome accession: NC_005085 Putative virulence/resistance : Unknown Product : integrase/recombinase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 3972144 - 3973031 bp Length : 888 bp Strand : - Note : identified by sequence similarity; ORF located using Glimmer/GeneMark/Blastx/COG0582 DNA sequence : ATGAGCTCGGATAAGGACAGCATCGACGCCTTCCTCGACCAGCTGTGGCTGGAGGACGGCCTGTCGCAGAACACGCTGGC CGCCTATCGCCGCGACCTGTCCAAGCTGGCGGCCAGGCTGGCGGAGCGCGGCGTTTCGCTGGAGACGGCCACGCTGGCCG ATCTGGAGCAGGCCTTGCTGGCCGGCGTGGCCAGCGAAAAGCCGGCCACCCGCGCGCGGCTGACGTCGGCGTTGCGCCGC TATTACCAGCATCTGTCGCGCAACGGCGTCCGCCAGGACGATCCCAGCGCCCGGCTGGCGTCGCCGAAGCAGGGGCTGAG GCTGCCCAAGTCGATGTCCGAGATGGACGTGGAGGCGCTGCTGGACGCGCCGGACGTGGAGACGCCGCTGGGCCTGCGCG ACCGCGCGATGCTGGAAGTGCTGTACGCCAGCGGCCTGCGGGTGTCCGAACTGGTGGGCATGACGCTGAACCAGCTGAAC CTGCTGGACGGCGTGGTGAAGACCATGGGCAAGGGCAGCAAGGAGAGGCTGGTGCCGCTGGGCGAAATCGCCCAGGACTG GCTGCTGCGCTATCTGAAGGAAGCGCGGCCGCTGCTCTTGGCCGGCCAGCCGTGCGACGCGGTGTTCGTCACCCAGCGCA AGGCGGGGATGACGCGGCAGATGGCCTGGCATCTGATCACCCAGTACGCTGGCCGGCAGGGCCTGGCCAAGGTCAGCCCG CACGTGCTGCGCCATGCCTTCGCCACTCATCTGGTCAATCACGGCGCCGACCTGCGCGTGGTGCAGCTGCTGCTGGGCCA CGCCGACATCTCCACCACCCAGATCTATACCCATGTCGCGCGCGAGCGGCTGAAGCAACTGCACGCGCGCCATCATCCGC GCGGCTGA Protein sequence : MSSDKDSIDAFLDQLWLEDGLSQNTLAAYRRDLSKLAARLAERGVSLETATLADLEQALLAGVASEKPATRARLTSALRR YYQHLSRNGVRQDDPSARLASPKQGLRLPKSMSEMDVEALLDAPDVETPLGLRDRAMLEVLYASGLRVSELVGMTLNQLN LLDGVVKTMGKGSKERLVPLGEIAQDWLLRYLKEARPLLLAGQPCDAVFVTQRKAGMTRQMAWHLITQYAGRQGLAKVSP HVLRHAFATHLVNHGADLRVVQLLLGHADISTTQIYTHVARERLKQLHARHHPRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00307 | YP_008207772.1 | Site-specific recombinase XerD | Not tested | AbaR25 | Protein | 1e-55 | 59 |
| BJAB0868_00311 | YP_008211637.1 | Site-specific recombinase XerD | Not tested | AbaR26 | Protein | 1e-55 | 59 |
