|
Name : mutS (CV_3661) Accession : NP_903331.1 Strain : Chromobacterium violaceum ATCC 12472 Genome accession: NC_005085 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 3960895 - 3963516 bp Length : 2622 bp Strand : + Note : This protein performs the mismatch recognition step during the DNA repair process DNA sequence : ATGGCGGCGATTCCAACGCCCCGCCTTCACCGGGGCGTTACGCATTTATCCAGACAGACCAAGAGCAGAGCCAGACACCC GATGAGCACGCCCCAGCACACCCCGATGATGCAGCAATATCTAGCCCTGAAGCGCGAACACGCCGACAAGCTGCTGTTCT ACCGCATGGGCGATTTCTATGAGCTGTTCTACGAGGACGCGGAAAAGGCTTCGCGGCTGCTGGACATCACCCTGACCGCT CGCGGCGCCAGCGCCGGCAATCCGATCAAGATGGCCGGCATTCCCTACCACGCCGCCGAAGGCTACCTGGCGCGGCTGGT GAAGATGGGCGAATCGGTGGCCATCGCCGAGCAGATCGGCGACCCGGCCTTGGCCAAGGGGCCGGTGGAGCGCAAGGTGG TGCGCATCGTCACGCCGGGCACGCTGACCGACGCCGCGCTGCTGGACGACAAGCGCGACAACCTGGTGCTGGCGGTCAAT ATGGTCAAGGGCGTGCTGGGCCTGGCTTGGCTGTCGCTGGCCAGCGGCGAGTTCAAGATCATGCAAGCTAGCGTCGAGGA CTTGGCCAGCGAGCTGGAACGCTTGAAGCCGGCCGAGCTGGTGATTCCCGACGACACCGGCCTGGCCGCCTTCGAAGGCA TCTCGACCCCGAAGAAAAAGCTGCCGCCGTGGCAGTTCGACATCGAATCGTCCAAGCTGGCGCTGACCCGCCACTTCGGC ACCCGCGATCTGGCCGGCTTCGGCGCCGACACGCTACCGGTGGCCGTCGGCGCGGCGGGCGCCTTGCTGGAATACGTGAA GTCCACCCAGGGCGTGAACCCGGCCCACATCTCCGCGCTGTCGGTGGAAGACGCCGGCGAGCTGATCCGCATGGACGCCG CCACCCGCCGCAATCTGGAACTGACCGAAACCATACGCGGCGAGGCCTCGCCGACGCTGGCGTCGCTGCTCGACACCTGC GCCACCAGCATGGGCAGCCGCCTGCTCGGCCACTGGCTGCACCATCCGATGCGCAACCACGGCAAGCTGGCCCGCCGCCA CGGCGCGGTGCGCGCGCTGCTGTCGCGCTACCAGGACGTGCACGCCGAGCTGGACCAGGTGTCCGACATCGAGCGCATCA CCTCGCGGGTGGCGCTGCGTTCCGCCCGCCCGCGCGATCTGTCGGCGCTGCGCGATTCCTTGACCGCCCTTTCCGGCGTC AAGGCGCTGGCGGCCTCGCTGGATTCCGAGCTGTTGAACGAGCTGGCCGGCGTGCTGCCGACCGAATCGCCGGTGCAAAA GATGCTGGCCGCCGCCATCCTGCCGGAGCCGGCCACCTTCCTGCGCGACGGCGGCGTGATCAATGACGGCTTCAGCCCGG TGCTGGACGAATTGCGGGCGATCCAGACCGACTGCGGCGATTTCCTGCTGAAACTGGAAGCGCGCGAGAAGGAACGCACC GGCATCACCACGCTGAAGGTGGAGTTCAACCGCGTGCACGGCTTCTACATCGAGGTGTCCAAGGCGCAGTCGGACAAGGT GCCGGACGACTACCGCCGCCGCCAGACGCTGAAAAACGCCGAGCGCTACATCACGCCGGAGCTGAAGGAATTCGAGGACA AGGCGCTGACCGCGCAGGACCGGGCGCTGGCGCTGGAAAAGCAGCTGTACGAGGCGCTGCTGGACCAGTTGGCCCCGCAC ATCGCCGAGCTGAAGCTGATCGCCCAGGCGGTGGCGGCGCTGGACGTGCTGTCCGCCTTCGCCCAACGCGCCGCCATCGG CAACTACGCCGAGCCGCAGTTCGTGCCCGAGCCCAAGCTCGACATCGTCGCCGGCCGCCACCCGGTGGTGGAAGCGGAAG TCGAACGCTTCATCGCCAACGACACCAGGCTGTCCGCCGAACGCAAGCTGCTGTTGATCACCGGCCCGAACATGGGCGGT AAGTCCACCTATATGCGGCAAAACGCGCTGATCACGCTGCTGGCCCACGTCGGCAGCTTCGTGCCGGCCGACAGCGCCGT GATCGGCCCCATCGACCGCATCTTCACCCGCATCGGCGCCAGCGACGACCTGGCCGGCGGCCGCTCCACCTTCATGGTGG AAATGACCGAAACCGCCAACATCCTCAACAACGCCAGCGAGCACTCGCTGGTGCTGATGGACGAGGTGGGCCGCGGAACG TCCACCTTCGACGGCCTGGCGCTGGCCTGGGCCATCGCCCGCGCGTTGATCGAAAAGAACCGTGCCTACACGTTGTTCGC CACCCACTACTTCGAACTGACCACGCTGGCCGGCGAATACCCGGCGGTGGCCAACGTTCACCTGTCGGCGGTGGAGCACA AGGACCGCATCGTGTTTCTGCACCACGTCGAGGACGGCCCCGCCAGCCAGAGTTACGGCCTGGCGGTGGCGCAGCTGGCC GGCGTGCCGGCCAAGGTGATACGCGACGCGCGACGCCATCTGGCCGAGCTGGAAAACCAGTCGGCGGCCCGGGTGCAGCC CGACCTGTTCTCCGCGCCGGCGCCCGCTTCCGAACCGGAACTTAGTCCTGCAATGGACCGTCTACAGGAGATCGATCCCG ACGTGCTGAGCCCGCGACAGGCGCTGGAAATCCTGTATGAGCTCAAAAAACTGGCCGATTGA Protein sequence : MAAIPTPRLHRGVTHLSRQTKSRARHPMSTPQHTPMMQQYLALKREHADKLLFYRMGDFYELFYEDAEKASRLLDITLTA RGASAGNPIKMAGIPYHAAEGYLARLVKMGESVAIAEQIGDPALAKGPVERKVVRIVTPGTLTDAALLDDKRDNLVLAVN MVKGVLGLAWLSLASGEFKIMQASVEDLASELERLKPAELVIPDDTGLAAFEGISTPKKKLPPWQFDIESSKLALTRHFG TRDLAGFGADTLPVAVGAAGALLEYVKSTQGVNPAHISALSVEDAGELIRMDAATRRNLELTETIRGEASPTLASLLDTC ATSMGSRLLGHWLHHPMRNHGKLARRHGAVRALLSRYQDVHAELDQVSDIERITSRVALRSARPRDLSALRDSLTALSGV KALAASLDSELLNELAGVLPTESPVQKMLAAAILPEPATFLRDGGVINDGFSPVLDELRAIQTDCGDFLLKLEAREKERT GITTLKVEFNRVHGFYIEVSKAQSDKVPDDYRRRQTLKNAERYITPELKEFEDKALTAQDRALALEKQLYEALLDQLAPH IAELKLIAQAVAALDVLSAFAQRAAIGNYAEPQFVPEPKLDIVAGRHPVVEAEVERFIANDTRLSAERKLLLITGPNMGG KSTYMRQNALITLLAHVGSFVPADSAVIGPIDRIFTRIGASDDLAGGRSTFMVEMTETANILNNASEHSLVLMDEVGRGT STFDGLALAWAIARALIEKNRAYTLFATHYFELTTLAGEYPAVANVHLSAVEHKDRIVFLHHVEDGPASQSYGLAVAQLA GVPAKVIRDARRHLAELENQSAARVQPDLFSAPAPASEPELSPAMDRLQEIDPDVLSPRQALEILYELKKLAD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 0.0 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| mutS | NP_903331.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 0.0 | 56 |
