|
Name : CV_3394 (CV_3394) Accession : NP_903064.1 Strain : Chromobacterium violaceum ATCC 12472 Genome accession: NC_005085 Putative virulence/resistance : Resistance Product : cystathionine gamma-lyase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0626 EC number : 2.5.1.48 Position : 3687960 - 3689102 bp Length : 1143 bp Strand : - Note : identified by sequence similarity; ORF located using Glimmer/GeneMark/Blastx/COG0626 DNA sequence : ATGACCGATTTCCACACCCTGGCCGTGACCGCCGGCGCGCACGAGGACCCGTTCGGCGCGGTGATGCCGCCGATCTACGC CACCTCCACCTACCGCCAGCACGCGCCGGGCGAGCACACCGGCTACGAGTATTCCCGCTCGCAGAACCCGACCCGCGAGG CGCTGGAGCGCGCGGTGGCCGAACTGGAAGGCGGCATCCGCGGCTACGCTTTCGGCTCCGGCTTGGCGGCGATCTCCACC GTGCTGGAGCTGCTGCCGGCCGGCAGCCACCTGATCGCGGTCAACGACCTGTACGGCGGCACCTATCGTCTGTTCGAGAA GGTGCGCAAGGCCAGCGCCAACCTGGAAGTGACCTATGTCGCCTCCGACGACAGCGCCGCGCTGGAGGCCGCCATCCGCC CGAACACCCGGATGATCTGGGTGGAAACGCCGTCCAATCCGTTGAACCAGCTGGTGGACCTGCAACAGGTGTCGGCCATC GCCCGCCGCCACAAGCTGATCGGCGTGGTCGACAACACTTTCGCCTCGCCGGTCAACCAGCGGCCGCTGGACTTCGGCTT CGACATCGTCGTCCACTCCGCCACCAAATACCTGAACGGCCATTCCGACGTGGTGGCCGGCGTGGCTGTGGTCAGCCGCG ACCAGCCGGAACTGGCCGAACAGCTGGCCTTCCTGCATAACGCGGTGGGCGCCATCCTGGACGCCTTCCCCAGCTTCCTG GTGCTGCGCGGCTTGCGCACGCTGGCGCTGCGCATCGAGCAGCACAACCGCAACGGCCTGGCCATCGCGCGCTGGCTGGA GGCGCAGCCTTGGGTGGAAAAGGTGCTGTACCCAGGCTTGGAAAGCCATCCGCAGCACGCGCTGGCGCGCCGCCAGATGC AGGGCTACGGCGGCATCGTGTCGTTCTATCTGAAGGGCGACGTCAAGGCCTTCCTGGCCAGGCTCAAGCTGTTCGCGCTG GCCGAAAGCCTGGGCGGCGTCGAAAGCCTGGTCTGCCTGCCGGCGGCGATGACCCACGCGTCGATTCCGGCCGAGCGCCG CGCCGCGCTCGGCATCCACGACAACCTGATCCGCCTGTCGGTCGGCGTCGAGGGCGAGGCGGCGCTGATCGCCGACCTGG AGCAGGCGCGGCGGGACAGCTGA Protein sequence : MTDFHTLAVTAGAHEDPFGAVMPPIYATSTYRQHAPGEHTGYEYSRSQNPTREALERAVAELEGGIRGYAFGSGLAAIST VLELLPAGSHLIAVNDLYGGTYRLFEKVRKASANLEVTYVASDDSAALEAAIRPNTRMIWVETPSNPLNQLVDLQQVSAI ARRHKLIGVVDNTFASPVNQRPLDFGFDIVVHSATKYLNGHSDVVAGVAVVSRDQPELAEQLAFLHNAVGAILDAFPSFL VLRGLRTLALRIEQHNRNGLAIARWLEAQPWVEKVLYPGLESHPQHALARRQMQGYGGIVSFYLKGDVKAFLARLKLFAL AESLGGVESLVCLPAAMTHASIPAERRAALGIHDNLIRLSVGVEGEAALIADLEQARRDS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAR0460 | YP_039909.1 | Cys/Met metabolism PLP-dependent enzyme | Not tested | vSa¥á | Protein | 4e-71 | 50 |
| SAS0418 | YP_042545.1 | Cys/Met metabolism PLP-dependent enzyme | Not tested | vSa¥á | Protein | 2e-72 | 50 |
| metB | YP_281510.1 | cystathionine beta-lyase | Not tested | Not named | Protein | 2e-50 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CV_3394 | NP_903064.1 | cystathionine gamma-lyase | BAC0207 | Protein | 2e-50 | 42 |
