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Name : treC (CV_3299) Accession : NP_902969.1 Strain : Chromobacterium violaceum ATCC 12472 Genome accession: NC_005085 Putative virulence/resistance : Unknown Product : a,a-phosphotrehalase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : 3.2.1.93 Position : 3590511 - 3592160 bp Length : 1650 bp Strand : - Note : identified by sequence similarity; ORF located using Glimmer/GeneMark/Blastx/COG0366 DNA sequence : ATGTCTAAGGACATGAAACGGGCGGTGGTGTACCAGATCTACCCCAAGAGCTTCAGCAGCCATCGCAATCAGGCGACGGG GGATCTCCTGGGCGTGGTGGACCGGCTGGACTACCTGGCCTGGCTGGGCGTCGACTACCTGTGGCTGACGCCGTTCTACC GCTCGCCGCAGCGCGACAACGGCTACGACGTCAGCGACTACTACAGCATCGACCCGGCTTATGGCGAGATGGAAGACTTC GAATTGCTGCTGGCCGAGGCCAAGCGGCGCGGCATCGGCGTGATGCTGGACATCGTGGTCAACCACACCTCCACCGAGCA CGCCTGGTTCCAGGAGGCTCGCAAGGGCAGGGACAATCCCTACCGCGACTTCTACATCTGGCGCGACGCGCCGAACAACT GGCAGTCCAAGTTCGGCGGCAGCGCCTGGGAGTGGGACGAGGCCAGCGGCCAGTACTACCTGCACCTGTTCGACAAGACC CAGGCCGACCTCAACTGGGAGAATCCGGCGGTGCGGGCCGAGGTGTACAAGATGATGCGCTTCTGGCGCGACAAGGGCGT GGCCGGCTTCCGCCTGGACGTGATCAACCTGATCTCCAAGGACCCGGCCTTCTCCGAGGACGACAGCGACGGCCGCCACT TCTACACCGACGGCCCGCGCGTGCACCAGCATCTGCAGGAGATGCACCGCGAGGTGTTCGACGGCCATGACTTGCTGACC GTGGGCGAGATGTCGTCCACCTCGTTGGAGCACTGCATCGCCTACAGCCGGCCGGACCGGCGCGAGCTGAGCATGACCTT CAATTTCCACCACCTGAAGGTGGATTACCCGGATGGCGAGAAATGGCGGCCGGGCGCGGTGGACTTCATCGCGCTCAAGC GCATCCTGTCCGACTGGCAAACCGGCATGCACGCCGGCGGCGGCTGGAACGCGCTGTTCTGGTGCAACCACGACCAGCCG CGCGCGCTGTCCCGCTTCGGCGACGACGGCCGCTGGCGGACCGAATCCGCCAAGATGCTGGCCACCGCGCTGCACGGCCT GCAGGGCACGCCTTATATCTACCAGGGCGAGGAGATCGCCATGGCCAATCCCGGTTTCGCCGACATCGGCCAGCTGCGCG ACGTGGAAAGCCTGAACGCTTATCGCCAGTTGCTGGCCGAGGGCTTCACCGCTGCCGACGCGATGGCGGTGATCCGCCAG CGCTCGCGCGACAACGCCCGCACGCCGATGCAGTGGGACGACGGCCCGAACGCCGGCTTCAGCGCCGCCGAGCCCTGGAT AGGCGTGGCGGCGGACGCCGGCAGCGTCAATGTCGCCACGGCCATCGGCGACCCCAACTCCACGGCACACCACTACCGTC GGCTGATCCAGCTGCGCAAGCAATACCGGGTGTTCGCCGACGGCGACTACCGCTGCCTGACGCCCGATCATCCCAGCCTG TGGATTTACACCCGCCGCTGCGCCGACGAAATGCTGCTGGCCATCAGCCACTTCGGCGCCGACGACAGCCATTACGCGCT GCCGGCCGGCGCGATGCCCGAGGGCTGGACGATGGAACTGCTGCTGTCCAACTACCCGCCGCAGCCCCCTGGCCGATTGC GGCCCTGGCATTCGCTGCTGTACCGGGCGACGCCGCCGGCCGCGACCTAA Protein sequence : MSKDMKRAVVYQIYPKSFSSHRNQATGDLLGVVDRLDYLAWLGVDYLWLTPFYRSPQRDNGYDVSDYYSIDPAYGEMEDF ELLLAEAKRRGIGVMLDIVVNHTSTEHAWFQEARKGRDNPYRDFYIWRDAPNNWQSKFGGSAWEWDEASGQYYLHLFDKT QADLNWENPAVRAEVYKMMRFWRDKGVAGFRLDVINLISKDPAFSEDDSDGRHFYTDGPRVHQHLQEMHREVFDGHDLLT VGEMSSTSLEHCIAYSRPDRRELSMTFNFHHLKVDYPDGEKWRPGAVDFIALKRILSDWQTGMHAGGGWNALFWCNHDQP RALSRFGDDGRWRTESAKMLATALHGLQGTPYIYQGEEIAMANPGFADIGQLRDVESLNAYRQLLAEGFTAADAMAVIRQ RSRDNARTPMQWDDGPNAGFSAAEPWIGVAADAGSVNVATAIGDPNSTAHHYRRLIQLRKQYRVFADGDYRCLTPDHPSL WIYTRRCADEMLLAISHFGADDSHYALPAGAMPEGWTMELLLSNYPPQPPGRLRPWHSLLYRATPPAAT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 9e-124 | 46 |
