Gene Information

Name : fliP (CV_3003)
Accession : NP_902673.1
Strain : Chromobacterium violaceum ATCC 12472
Genome accession: NC_005085
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 3278104 - 3278850 bp
Length : 747 bp
Strand : +
Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus

DNA sequence : 
ATGAAACGCGCACTTCCCCTGCTGCCGCTCGCCGCCGCTGGCCTGCTCGCGGCCGCGCCAGCCTGGGCCGAGCCGCTGAA
GCTGCTGTCCGCCAACGCCGGCGGCTCATCCGTCGACTTCACGATCAAGACCCAGATCCTGATCCTGATGACGGCGCTGG
GCCTGCTGCCGGTGCTGGTGCTGATGATGACCAGCTTCACGCGCTTCGTCATCGTGCTGTCGCTGCTGCGCCAGGCGCTG
GGCCTGCAGCAGGGCCTGCCCAACCGCCTGATCACCGGCGTGGCGCTGATCCTGACGCTGCTGGTGATGCGCCCGGTGGG
ACTGCAGGTGTGGAACGAGGCGATGGTGCCCTTCGACCAGGACAAGATCACCATGCAGCAGGCGCTGGAGATCGCCGCCA
AACCGGTCAGCCGCTTCATGCTGGCCCAGACCGGCAAGACCGCGCTGGCCCAGGTGGCGCGCCTGTCCGGCGAGGAAAAC
GTCGCCCGCCCGGAAGACCACGCCTTCACCGTCAAGCTGGCGGCCTTCGTGCTGTCCGAGCTGAAAACCGCGTTCCAGAT
CGGCTGCATGCTGTTCATTCCCTTCCTGGTGATAGACCTGGTGGTGTCCAGCGTGCTGATGGCGATGGGCATGATGATGC
TGTCGCCGCTGGTGATCTCGTTGCCGCTGAAGCTGCTGCTGTTCGTGCTGGTGGACGGCTGGTCGCTGACCGTCAACACG
CTGGTCACGTCGATACAGGCCTATTAG

Protein sequence : 
MKRALPLLPLAAAGLLAAAPAWAEPLKLLSANAGGSSVDFTIKTQILILMTALGLLPVLVLMMTSFTRFVIVLSLLRQAL
GLQQGLPNRLITGVALILTLLVMRPVGLQVWNEAMVPFDQDKITMQQALEIAAKPVSRFMLAQTGKTALAQVARLSGEEN
VARPEDHAFTVKLAAFVLSELKTAFQIGCMLFIPFLVIDLVVSSVLMAMGMMMLSPLVISLPLKLLLFVLVDGWSLTVNT
LVTSIQAY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 5e-15 42
lscR AAO18040.1 LscR Virulence TTSS locus Protein 1e-12 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP NP_902673.1 flagellar biosynthesis protein FliP VFG1259 Protein 1e-35 54
fliP NP_902673.1 flagellar biosynthesis protein FliP VFG2338 Protein 6e-32 52
fliP NP_902673.1 flagellar biosynthesis protein FliP VFG2016 Protein 4e-31 50
fliP NP_902673.1 flagellar biosynthesis protein FliP VFG2494 Protein 7e-33 50
fliP NP_902673.1 flagellar biosynthesis protein FliP VFG0394 Protein 9e-13 42
fliP NP_902673.1 flagellar biosynthesis protein FliP VFG0044 Protein 3e-13 41