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Name : spaR (CV_2622) Accession : NP_902292.1 Strain : Chromobacterium violaceum ATCC 12472 Genome accession: NC_005085 Putative virulence/resistance : Virulence Product : surface presentation of antigens secretory protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4791 EC number : - Position : 2830397 - 2831164 bp Length : 768 bp Strand : - Note : identified by sequence similarity; ORF located using Glimmer/GeneMark/Blastx/COG1684/TC:3.A.6.1.1 DNA sequence : GTGCAGTTCAGCTTTTTCTTCGAGGTGCACGGCTGGGTGGCCGCGGCCGCCATCGGCTTCGCCCGCGTGGCGCCGGTGTT CTTCATCCTGCCCTTCCTCAACGGCAACACGCTGACCGGCATGGTGCGCACCTCGGTGGCGATGCTGGTGGCGCTGGGCC TGTGGCCGCACCCGCCGCTGGCCATGCACGCGATGCAGGCCTGGCCGTTGCTGGCGCTGCTGATGCGGGAGGCGACGGTC GGCCTGTTGCTGGGCTGCCTGCTGGCCTGGCCGTTCTGGGCGTTCCACGCGATGGGCAGCATTATAGACAACCAGCGCGG CGCCACGCTCAGCAGCAGCATCGATCCGGCCAACGGGGTGGATACCTCGGAAATGGCCAATCTGCTCAACCTGTTCGCCG CCGCTGTCTACCTGCAGGGCGGCGGCATGGAGCTGATGCTGGACGTGATGCGCCAGAGCTATCAGCTGCTGGATCCGCTG GGCGACGGCCTGCCGCCGCTGGCGCCGGTGCTGTCCCTGCTCAACCAGGTGATCGCCAAATCCATCGTGCTGGCCAGCCC GGTGATGGCGACGCTGTTGTTGTCCGAGGCGGTGCTGGGCCTGTTGTCGCGCTTTGCGCCGCAGATGAACGCGTTCGCGG TGTCGCTGACGGTGAAAAGCGCGGCGGCGCTGCTGATCATGCTGCTCTATTTCGCGCCGGTGCTGCCCGACGCGGTGGCC GGCCTGGCCCTGCGCCCCGGCGCGCTGGGCACCTGGTTGGTGCGCTGA Protein sequence : MQFSFFFEVHGWVAAAAIGFARVAPVFFILPFLNGNTLTGMVRTSVAMLVALGLWPHPPLAMHAMQAWPLLALLMREATV GLLLGCLLAWPFWAFHAMGSIIDNQRGATLSSSIDPANGVDTSEMANLLNLFAAAVYLQGGGMELMLDVMRQSYQLLDPL GDGLPPLAPVLSLLNQVIAKSIVLASPVMATLLLSEAVLGLLSRFAPQMNAFAVSLTVKSAAALLIMLLYFAPVLPDAVA GLALRPGALGTWLVR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| spaR | NP_457282.1 | secretory protein (associated with virulence) | Virulence | SPI-1 | Protein | 1e-53 | 61 |
| spaR | NP_806491.1 | virulence-associated secretory protein | Virulence | SPI-1 | Protein | 1e-53 | 61 |
| spaR | NP_461809.1 | needle complex export protein | Virulence | SPI-1 | Protein | 8e-53 | 61 |
| spaR | YP_217807.1 | surface presentation of antigens; secretory proteins | Virulence | SPI-1 | Protein | 1e-50 | 60 |
| spaR | AAS66867.1 | SpaR | Not tested | SSR-2 | Protein | 6e-31 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| spaR | NP_902292.1 | surface presentation of antigens secretory protein | VFG0549 | Protein | 3e-53 | 61 |
| spaR | NP_902292.1 | surface presentation of antigens secretory protein | VFG1014 | Protein | 7e-35 | 50 |
| spaR | NP_902292.1 | surface presentation of antigens secretory protein | VFG2453 | Protein | 7e-31 | 42 |
| spaR | NP_902292.1 | surface presentation of antigens secretory protein | VFG1771 | Protein | 1e-27 | 41 |
