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Name : spaS (CV_2621) Accession : NP_902291.1 Strain : Chromobacterium violaceum ATCC 12472 Genome accession: NC_005085 Putative virulence/resistance : Virulence Product : surface presentation of antigens protein SpaS Function : - COG functional category : N : Cell motility COG ID : COG1377 EC number : - Position : 2829334 - 2830395 bp Length : 1062 bp Strand : - Note : Required for surface presentation of invasion plasmid antigens; required for invasion and for secretion of the three ipa proteins DNA sequence : ATGTCGTCCAACAAGACCGAGAAACCCACGCGCAAGAAGCTGCAGGACGCGGCCAAAAAGGGCCAGTCCTTCAAGAGCCG CGACCTGGTGGTGGCCTGCCTGACGCTGTGCGGCGTGGCTTACCTGGTGTCGTTCGGCTCGCTGGTCGAGTTGATGGGCA TTTTCCGCCAGGCCCTGGCCGGCGGTTTCCAGCTGGACATGCGCGGCTACGCCCAGGCGGTGTTCTGGCAAGGGCTGAAA TTGCTGCTGCCCATCTTCCTGCTGTGCGTGGCCGCCTCGGCGCTGCCGGTGTTGCTGCAGACCGGCTTCGTGCTGGCCAG CGAGGCGCTCAAGCTCAATCTGGAGGCGCTCAACCCGATCAACGGCTTCAAGAAGCTGTTCAGCCTGCGCACGGTGAAGG AGGCGGTGAAGGCGCTGCTGTACCTGGCCAGCTTCGTGGTGGCCGTGGCGCTGATCTGGCGCAAGCACAAGGCGCTGCTG TTCGCCCAGCTTAACGGCAGCGTCATGGACATCGCCGCCGTGTGGCGAGAGCTGCTGCTGTCTCTGGTGCTGACCTGCCT GGGCTGCATCGTGCTGATCCTGATTCTGGACGCGCTGGCCGAGTACTTCCTGTTCATGAAGGACATGAAGATGGACAAAC AGGAAGTGAAGCGCGAGATGAAGGAGCAGGAAGGCAATCCCGAAATCAAGTCGCGCCGGCGCGAGGCGCATTTCGAGCTG CTGTCCGAGCAGGTGAAGTCGGACGTGGAGAACTCCAGGCTGATCATCGCCAACCCCACCCATATCGCCATCGGCATTTA TTTCCGGCCCGAGCTGGTGCCCATCCCCTTCGTGTCGGTGATGGAAACCAACCAGCGCGCGCTGGCGGTGCGCGCCTACG CGGAGAAGGTCGGCGTGCCGGTGGTGCGCGACGTGCCGCTGGCGCGGCGCATCCTGGCCAGCCACCGCCGCTATTCCTTC ATCAACCTGGAAGAGGTGGACGAGGTGCTGCGCCTGCTCGAATGGCTGGAACAGGTGGAAAACGCCGGTCGTCCGGACGA TGAGCCGTCCGGCGGGCCATGA Protein sequence : MSSNKTEKPTRKKLQDAAKKGQSFKSRDLVVACLTLCGVAYLVSFGSLVELMGIFRQALAGGFQLDMRGYAQAVFWQGLK LLLPIFLLCVAASALPVLLQTGFVLASEALKLNLEALNPINGFKKLFSLRTVKEAVKALLYLASFVVAVALIWRKHKALL FAQLNGSVMDIAAVWRELLLSLVLTCLGCIVLILILDALAEYFLFMKDMKMDKQEVKREMKEQEGNPEIKSRRREAHFEL LSEQVKSDVENSRLIIANPTHIAIGIYFRPELVPIPFVSVMETNQRALAVRAYAEKVGVPVVRDVPLARRILASHRRYSF INLEEVDEVLRLLEWLEQVENAGRPDDEPSGGP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| spaS | NP_461808.1 | surface presentation of antigens protein SpaS | Virulence | SPI-1 | Protein | 7e-104 | 69 |
| spaS | NP_457281.1 | secretory protein (associated with virulence) | Virulence | SPI-1 | Protein | 2e-104 | 69 |
| spaS | NP_806490.1 | surface presentation of antigens protein SpaS | Virulence | SPI-1 | Protein | 2e-104 | 69 |
| spaS | YP_217806.1 | surface presentation of antigens protein SpaS | Virulence | SPI-1 | Protein | 2e-103 | 69 |
| spaS | AAS66868.1 | SpaS | Not tested | SSR-2 | Protein | 3e-93 | 63 |
| ECs3721 | NP_311748.1 | surface presentation of antigens protein SpaS | Not tested | LIM | Protein | 3e-76 | 56 |
| ysaU | AAS66849.1 | YsaU | Not tested | SSR-1 | Protein | 1e-60 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| spaS | NP_902291.1 | surface presentation of antigens protein SpaS | VFG0548 | Protein | 3e-104 | 69 |
| spaS | NP_902291.1 | surface presentation of antigens protein SpaS | VFG2452 | Protein | 4e-62 | 50 |
| spaS | NP_902291.1 | surface presentation of antigens protein SpaS | VFG1015 | Protein | 4e-65 | 48 |
| spaS | NP_902291.1 | surface presentation of antigens protein SpaS | VFG1770 | Protein | 2e-53 | 42 |
