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Name : sipB (CV_2619) Accession : NP_902289.1 Strain : Chromobacterium violaceum ATCC 12472 Genome accession: NC_005085 Putative virulence/resistance : Virulence Product : cell invasion protein Function : - COG functional category : S : Function unknown COG ID : COG3566 EC number : - Position : 2826967 - 2828718 bp Length : 1752 bp Strand : - Note : identified by sequence similarity; ORF located using Glimmer/GeneMark/Blastx/COG0840/TC:1.C.36.3.2 DNA sequence : ATGAGTGACGCAAGCGCAATCAGCCGCAGCGCATACCTGCACAATCCCAAGCTGGCCGAAACCGCGTTCGAGAGCGTCCG CAAGGACGGCACCTTCCTCGACGCCGCGGACAAGGCGCTCAAGGCGGTGCTGGCCACCAAGGCCGGCGAGGCCGATGGCA AGGCGCCGATCCGCGAGCGCGACCTCGCGACGCCCGCGTTGACCCAGCCCACGGCCAAGGCCAAGGAAGAGCTGGACGGC GCCGGCAAGCTGACGCTGTTGCTGGGGCAGTTGATGTCCCTGCTCGGCAATGTTTCGCTGTCGCAGCTGGAAAGCCGCAT CGCCACCTGGCGCGCGATGATGGAAGCGCAAGTGGCGATGGGCGAGAAACTGTCCCAAGAGTTCCAGGACGCGTTCAAGG CGGCGAGCGAAGCCACCGAGGCGCTGAAAGACGCCGTGGGCAACTACGACAGCGCCAAACAGGCCGCGGACGCAGCCCAG AAGAAAGCTGACGCCGCCCAGGCCAAGGTGGACGGAATGTCGCCGGACGAGCCCGGCTACGCCGAAGCCCAGGCCGCCAG CCAGCAGGCCGCCGCCGACGCGCTGCAGGCCAAACAGAAGGCGGACAAGGCTTACGACGCCGCTGAAAAGGCCCGCGTCG TCGCCGTGGAGAAGGGCAAGGTCGCGGACGATCTGGCCGGCAAGGTGCAGGGCGCCAACGTCAACGCCGACGTCGCGCGC AAGACCGGCGAGGACAACCTCTCCAACGTCGCCAAGCTGACCTTGCTGATGGCGATGTTCGTCGAGCTGGTGGGCAAGAA CAGCGAAGAGAGCCTGAAAAACGACCTCGCCTTGTTCCAGGCCTTGCAGGAAGGCCGTCAGAAGGAAATGGACAAGAAGT CCGCCGAGTACCAGGAAGAGGTGCGCAAGGCGGAGGAGCTCAATCGCACCATGGGGTGCATTGGCAAGATTCTGGGCGCG CTGCTGACGGTGGTCAGCGTCGTGGCCGCGGCATTCACCGGCGGCGCCAGCCTGGCGCTGGCCGCGGTGGGCGTCGCGCT GATGGTGGCCGACGAAGTGGTCAAGGCCGCCACCGGGGTGTCCTTCATGCAGGAGGCGTTGAAGCCGCTGATGGACAAGG TCCTCAAACCCTTGATGGACCTGATAGGCAAGGCCATCACCAAGGCGCTGGAAGGCATGGGGGTGGACAAGAAGACCGCC GAGCTGGCTGGCTCCATCGCCGGCGCGGTACTGGCCGCCGTCGCCATGGTGGTGGTGATGGTGGTGGTGGCCGTGGTGGG CAAGGGCGCCGCCGGCAAGCTCGGCGGGGCGCTCAGCAAGCTGCTGGGCGACGCCATCAAGAAGATCGTGCCCAATGTGC TGAAGGAACTGGCCAAGGGCGGCAGCAAGATGCTGACCCAGGGCTTCCAGCGTCTGGCCAACAGCCTGGGCCTGCAGACC GACGCCGCCGCCAAACAGATGATGGCCAACACGCTGGGCCGCGTGGTGGTGGGCGGCGAGGTGGCGCAAGCCACTTCGCA GGCCGGCGGCAACGTGGCGCAAGGCGTGTTCATGAAGAACGCCAGCGACGCCCTGGCCGATTTCACCCTGGCGCGCGCCG CCATGGAACAGATCGAGCAATGGCTGAAGCAAGCGGTGGAAGTGTTCGCCAGCACCCAGAAAGTCACCCAGGAGCTGACC ACGGCCATGTCCGCCGCGGTGCAGCAGAACGCCGAGGCCGGCCGTTTCGTGCTGCGCCAGAGCCACGCCTGA Protein sequence : MSDASAISRSAYLHNPKLAETAFESVRKDGTFLDAADKALKAVLATKAGEADGKAPIRERDLATPALTQPTAKAKEELDG AGKLTLLLGQLMSLLGNVSLSQLESRIATWRAMMEAQVAMGEKLSQEFQDAFKAASEATEALKDAVGNYDSAKQAADAAQ KKADAAQAKVDGMSPDEPGYAEAQAASQQAAADALQAKQKADKAYDAAEKARVVAVEKGKVADDLAGKVQGANVNADVAR KTGEDNLSNVAKLTLLMAMFVELVGKNSEESLKNDLALFQALQEGRQKEMDKKSAEYQEEVRKAEELNRTMGCIGKILGA LLTVVSVVAAAFTGGASLALAAVGVALMVADEVVKAATGVSFMQEALKPLMDKVLKPLMDLIGKAITKALEGMGVDKKTA ELAGSIAGAVLAAVAMVVVMVVVAVVGKGAAGKLGGALSKLLGDAIKKIVPNVLKELAKGGSKMLTQGFQRLANSLGLQT DAAAKQMMANTLGRVVVGGEVAQATSQAGGNVAQGVFMKNASDALADFTLARAAMEQIEQWLKQAVEVFASTQKVTQELT TAMSAAVQQNAEAGRFVLRQSHA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sipB | YP_217804.1 | cell invasion protein | Virulence | SPI-1 | Protein | 2e-104 | 62 |
| sipB | NP_461806.1 | translocation machinery component | Virulence | SPI-1 | Protein | 9e-104 | 62 |
| sipB | NP_457279.1 | pathogenicity island 1 effector protein | Virulence | SPI-1 | Protein | 8e-104 | 62 |
| sipB | NP_806488.1 | pathogenicity island 1 effector protein | Virulence | SPI-1 | Protein | 8e-104 | 62 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| sipB | NP_902289.1 | cell invasion protein | VFG0546 | Protein | 4e-104 | 62 |
