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Name : sipD (CV_2617) Accession : NP_902287.1 Strain : Chromobacterium violaceum ATCC 12472 Genome accession: NC_005085 Putative virulence/resistance : Virulence Product : pathogenicity island 1 effector protein Function : - COG functional category : - COG ID : - EC number : - Position : 2824350 - 2825549 bp Length : 1200 bp Strand : - Note : - DNA sequence : ATGTACGGCATTCAAACTTCCGCTTCTCTGCCGCTGACGCGGCCGCAAGCTCTCGAAACCCAGGCCGCCGCGCCGCAATC CGACGCGCCGGACGCATCCGCCGGACAGACGCGCGCCGCGCCGCAGGGATCGGCCGCGCCGGCGCTGGCCGCCGCCCGGG CCAAGGCCGACGAGTTGGGCCAGGCCGCGCGCGAGGTCCGCGCCAGCGTCGAACGCCAGACCGCTTACGAAACCAGGCTG GCGGCACAACGCTCGGCGGCGGCGTTCTCCGGCGGCGAACCGCCGCAGGCCAGGCGCGAGGCGCCGGGCGCGGAACTGGA CGAGGCCCGGAACGCGCAGACCGTGAGCGCCAGGCTGTTCGAAGGCAATCTGAAAGGCGTGGCGCAAAGCGGCCACGCGA TGAGCGCAGAGCAAAAGCAGGCGCTGCAGTCCGGGCTGGACGACGTGTTCGCCGACGCGCCGCCCCAGGCCCGCTCCGCC GGCGCGCCCATGCTGTACTCGGCGAATGCCGCCGCCGGCCAGGGCATGGCGGACAGCGACCTGTGGGACATGATCAGCGA CCAAATCGGCAAGATCAAGGACAACTACCTGGGCGTCTACGAGAACGTGGTCGGCCAGTACACCGATTTCTACAAGGCGT TCAGCGACATCCTGTCGCAGATGGCCAACTGGATCAAACCCGGCGGCGACGGCAACAAGGTCAAGTTGAACGTGGACGCG TTGAAGGCCGCGCTGGAAAAGCTGAAAAAGGATTTTTCGCTGGGCGACAACTTGGACAACAAGAAGGCCGTGCTGTTTCC GGCGCAGAGCAAGGATGGCGGCATTCAGGGCGGCAGCGAGAGCGACGCCAGAAAGTGGGCCAAGGAAATGGGATTGCCCG ATGCTCCTCCCCCAGGATTTTCTTGTGTTCAAAAAGCGGCCGACGGCAACTGGGTCGTGGTGGTCGACATGACGCCGATC GACACCATGATCCGGGATGTGGGCGCGCTGGGCAGCGGCACCGAGCTGGAACTGGACAACGCTAAGTTCCAGGCTTGGCA GTCCGGTTTCAAGGCGCAGGAGGAAAACCTGAAAAACACCCTGCAGACGCTGACCCAGAAGTACAGCAACGCCAACTCGC TGTTCGACAACCTGGTCAAGGTGCTCAGCAGCACCATCAGCAGCTGCCTGGAAACCGCCAAGTCCTTCCTGCAAATCTGA Protein sequence : MYGIQTSASLPLTRPQALETQAAAPQSDAPDASAGQTRAAPQGSAAPALAAARAKADELGQAAREVRASVERQTAYETRL AAQRSAAAFSGGEPPQARREAPGAELDEARNAQTVSARLFEGNLKGVAQSGHAMSAEQKQALQSGLDDVFADAPPQARSA GAPMLYSANAAAGQGMADSDLWDMISDQIGKIKDNYLGVYENVVGQYTDFYKAFSDILSQMANWIKPGGDGNKVKLNVDA LKAALEKLKKDFSLGDNLDNKKAVLFPAQSKDGGIQGGSESDARKWAKEMGLPDAPPPGFSCVQKAADGNWVVVVDMTPI DTMIRDVGALGSGTELELDNAKFQAWQSGFKAQEENLKNTLQTLTQKYSNANSLFDNLVKVLSSTISSCLETAKSFLQI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sipD | NP_457277.1 | pathogenicity island 1 effector protein | Virulence | SPI-1 | Protein | 7e-63 | 52 |
| sipD | NP_806486.1 | pathogenicity island 1 effector protein | Virulence | SPI-1 | Protein | 7e-63 | 52 |
| sipD | YP_217802.1 | cell invasion protein | Virulence | SPI-1 | Protein | 9e-60 | 51 |
| sipD | NP_461804.1 | translocation machinery component | Virulence | SPI-1 | Protein | 2e-60 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| sipD | NP_902287.1 | pathogenicity island 1 effector protein | VFG0544 | Protein | 9e-61 | 51 |
