Name : escT (CV_2609) Accession : NP_902279.1 Strain : Chromobacterium violaceum ATCC 12472 Genome accession: NC_005085 Putative virulence/resistance : Virulence Product : type III secretion system EscT protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4791 EC number : - Position : 2817405 - 2818178 bp Length : 774 bp Strand : + Note : identified by sequence similarity; ORF located using Glimmer/GeneMark/Blastx/COG1684/TC:3.A.6.1.1 DNA sequence : ATGGTCTACTGGACGCAATGGCTGCCGGTGCTCGGCCTGTGCATGCTGCGCCCGCTGGGTGTCTTTCTGCTGATGCCGCT GTTCAGCACCGCCAATCTGGGCGGCGCGCTGATCCGCAACTCGCTGGTGCTGATGATCGCTCTGCCCCTGCTGCCGGTTT ACCCGCAATGGCAGCTGCCCGCTGCCGGCGCCTGGGGCTATGTCCTGCTCGCTGCCGGAGAAATATGTATCGGGCTCATG ATCGGCTTCTGCGCCGCCATCCCGTTCTGGGTGCTGGACATGGCCGGTTTCCTGATAGACACCATGCGCGGCTCGTCGAT GGCCAGCGTGCTGAACCCCTTGCTGGGCCAGCAGTCCTCGCTGTTCGGCCTGCTGTTCACTCAGATATTCGGCGTGCTGT TTCTGATCAGCGGCGGCTTCAATGAATTGCTCGAAGCGATTTACCAGTCCTACGTGACCCTGCCGCCCGGCGCCGCCATC CACTACTCGCCCGAAGCCCTGTCGTTCTTCTATCGTCAATGGCAGCTGATGTACGAGCTGTGCCTGCGCTTTTCCATGCC CGCCATCGTGGTCATCCTGCTGGTGGACATGGCGCTGGGCCTGGTCAACCGTTCCGCTCAGCAATTGAATGTGTTTTTTC TGTCCATGCCGATCAAGAGCGCGTTCGCGCTGCTGATGCTGATCGTCAGCCTGAGCTTCGCCTTCAACGGCTTGCTGGAT TACAGCGCGCATTTCACCAAGCTGACCGACGCCTTGCTGGAGCAGTTGAGATGA Protein sequence : MVYWTQWLPVLGLCMLRPLGVFLLMPLFSTANLGGALIRNSLVLMIALPLLPVYPQWQLPAAGAWGYVLLAAGEICIGLM IGFCAAIPFWVLDMAGFLIDTMRGSSMASVLNPLLGQQSSLFGLLFTQIFGVLFLISGGFNELLEAIYQSYVTLPPGAAI HYSPEALSFFYRQWQLMYELCLRFSMPAIVVILLVDMALGLVNRSAQQLNVFFLSMPIKSAFALLMLIVSLSFAFNGLLD YSAHFTKLTDALLEQLR |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
YPO0272 | YP_002345354.1 | type III secretion apparatus protein | Virulence | Not named | Protein | 2e-44 | 53 |
ssaT | NP_456107.1 | putative type III secretion protein | Virulence | SPI-2 | Protein | 2e-39 | 46 |
ssaT | NP_805092.1 | type III secretion protein | Virulence | SPI-2 | Protein | 2e-39 | 46 |
ssaT | YP_216429.1 | secretion system apparatus protein SsaT | Virulence | SPI-2 | Protein | 7e-40 | 46 |
ssaT | CAA68201.1 | secretion system apparatus, SsaT | Virulence | SPI-2 | Protein | 3e-39 | 46 |
ssaT | NP_460386.1 | type III secretion system apparatus protein | Virulence | SPI-2 | Protein | 4e-39 | 46 |
lscT | AAO18038.1 | LscT | Virulence | TTSS locus | Protein | 4e-23 | 42 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
escT | NP_902279.1 | type III secretion system EscT protein | VFG0521 | Protein | 2e-39 | 46 |