Gene Information

Name : CV_2599 (CV_2599)
Accession : NP_902269.1
Strain : Chromobacterium violaceum ATCC 12472
Genome accession: NC_005085
Putative virulence/resistance : Virulence
Product : LuxR family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 2807009 - 2807662 bp
Length : 654 bp
Strand : +
Note : identified by sequence similarity; ORF located using Glimmer/GeneMark/Blastx/COG2197

DNA sequence : 
ATGATGACGCCAGCCGCCCCTTCCGACGCTGCCGTACAACGGGTACTTTTGGTAGAAGACCATTCCCTATTGAGCAATGG
CATCAAAAACCTGTTATCGGCATTGCCAAGCTATCATGTGGTCGGTGAAGTCAATGATGGTCTGGGAGTCTATTCCGCCT
GTCAGCGGTTAATGCCGGATTTGGTATTGCTGGACTTGGGTTTGCCAGGCATGGATGGCATCGACGTCATTCGCCAATTG
AAACAACGCTGGCCGGAGCTGAACATCATCGTGATCACCGCCGACAGCGCCGAACATAGAGCGCGGGCGGCGCTGGATGC
GGGAGCGCTCGCCTATGTGCTGAAGAAAAGCCCGCAACAGACTTTGCTGGCCGCGCTACAGATTGCATCCCAGGGTCATA
TTTTCCTCGACCCGTCCCTCGATCTGGAACAAATCACCGAAACCCGCAACGTGGAAGGCCCAACCCGGCTGACCATGCGG
GAAAACCAGGTGCTGAAGCTAATCGCGGAAGGCATGCGCAACCGGGACATCGCGGAGAGTCTGAAAATCACCATCAAGAC
AGTGGAAACCCACCGGCTGAATCTGATGCGCAAACTGGATGCCCACAATGCGGTAGAGCTGACCAACTGGGCGATCCGAC
TAGGCATACACTAG

Protein sequence : 
MMTPAAPSDAAVQRVLLVEDHSLLSNGIKNLLSALPSYHVVGEVNDGLGVYSACQRLMPDLVLLDLGLPGMDGIDVIRQL
KQRWPELNIIVITADSAEHRARAALDAGALAYVLKKSPQQTLLAALQIASQGHIFLDPSLDLEQITETRNVEGPTRLTMR
ENQVLKLIAEGMRNRDIAESLKITIKTVETHRLNLMRKLDAHNAVELTNWAIRLGIH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0255 YP_002345335.1 two-component response regulator Not tested Not named Protein 8e-37 53
ssrB CAB09344.1 SsrB Virulence SPI-2 Protein 1e-27 51
ssrB YP_216399.1 secretion system transcriptonal activator Virulence SPI-2 Protein 2e-31 50
ssrB NP_456137.1 putative two-component response regulator Virulence SPI-2 Protein 1e-31 50
ssrB NP_805062.1 two-component response regulator Virulence SPI-2 Protein 1e-31 50
ssrB NP_460356.1 transcriptional activator Virulence SPI-2 Protein 1e-31 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CV_2599 NP_902269.1 LuxR family transcriptional regulator VFG0492 Protein 4e-32 50