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Name : ssaJ (CV_2588) Accession : NP_902258.1 Strain : Chromobacterium violaceum ATCC 12472 Genome accession: NC_005085 Putative virulence/resistance : Virulence Product : type III secretion system apparatus lipoprotein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4669 EC number : - Position : 2788155 - 2788880 bp Length : 726 bp Strand : + Note : identified by sequence similarity; ORF located using GeneMark/Blastx/COG1766/TC:3.A.6.1.1 DNA sequence : ATGAAAGCCCTCCGCCGTTTATGGCCGTTATTGATCCTGATGAGCCTGATGGGCTGCAAAGTGGACCTGTATAGCGGACT GAGCGAGGATGAAGCCAACCAGATGCTGGCCTTGCTAATGTTGCGCAATGTCGATGCCGAAAAGAAAATCATCAAGGAAG GCAATGTCACTGTCAGGGTGGAAAAAGAGCAGTTCACCGATGCGGTGGAAGTGCTGCGCCAGCATGGTCTGCCCAGCAAG CGCACCGAAACCATGGCGGATCTGTTTCCCTCCGGCCAACTGGTCACTTCGCCCGCACAAGAACAAGCCAAGATCGGCTA TCTGAAGGAACAGCTGCTGGAAAAGATGCTGCGCGGCATGGACGGCGTGATCAGCGCCCAGGTTTCCATCGCGGAAAGCG TCAGCCAGAACCGGCGGGAGGCGCCTGCGCCGTCCGCCTCGGTCTTCATCAAGTACAGCCCCGGCATCAATATGCAAAGT CGCGAAACCGATATCAAACGGCTGATCCACACTGGCGTGCCTAATCTGCGCTCGGAAAACATCAGCGTGGTGTTGCAAGC AGCCGACTATCGCTATCGCCCAACCGCGACTACCGCGCAACCAGCTAAAAACACGCAGAGTTGGCTGCGGAAATACGCCA TATGGCTTGTCGGCGGCCTAACCCTGCTGGGCTGCGCCGCCGCCATCGGTGTGCTGGCCTGGCGCCGGCGCACGGCCGCA TCATGA Protein sequence : MKALRRLWPLLILMSLMGCKVDLYSGLSEDEANQMLALLMLRNVDAEKKIIKEGNVTVRVEKEQFTDAVEVLRQHGLPSK RTETMADLFPSGQLVTSPAQEQAKIGYLKEQLLEKMLRGMDGVISAQVSIAESVSQNRREAPAPSASVFIKYSPGINMQS RETDIKRLIHTGVPNLRSENISVVLQAADYRYRPTATTAQPAKNTQSWLRKYAIWLVGGLTLLGCAAAIGVLAWRRRTAA S |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| YPO0263 | YP_002345344.1 | type III secretion system apparatus lipoprotein | Virulence | Not named | Protein | 3e-51 | 51 |
| ssaJ | CAA12196.1 | SsaJ | Virulence | SPI-2 | Protein | 3e-40 | 48 |
| ssaJ | CAA70532.1 | secretion system apparatus | Virulence | SPI-2 | Protein | 3e-40 | 48 |
| ssaJ | NP_460374.1 | needle complex inner membrane lipoprotein | Virulence | SPI-2 | Protein | 4e-40 | 48 |
| unnamed | AAL06364.1 | EscJ | Virulence | LEE | Protein | 4e-33 | 45 |
| ssaJ | NP_456119.1 | putative pathogenicity island lipoprotein | Virulence | SPI-2 | Protein | 2e-40 | 44 |
| ssaJ | NP_805080.1 | pathogenicity island lipoprotein | Virulence | SPI-2 | Protein | 2e-40 | 44 |
| ssaJ | YP_216417.1 | secretion system apparatus protein SsaJ | Virulence | SPI-2 | Protein | 8e-41 | 44 |
| escJ | YP_003236093.1 | T3SS structure protein EscJ | Virulence | LEE | Protein | 7e-33 | 43 |
| escJ | NP_290273.1 | hypothetical protein | Virulence | LEE | Protein | 7e-33 | 43 |
| escJ | AAC38379.1 | EscJ | Virulence | LEE | Protein | 5e-33 | 43 |
| ECs4573 | NP_312600.1 | EscJ | Virulence | LEE | Protein | 7e-33 | 43 |
| escJ | AAC31518.1 | L0039 | Virulence | LEE | Protein | 5e-33 | 43 |
| escJ | ACU09463.1 | EscJ protein | Virulence | LEE | Protein | 5e-33 | 43 |
| escJ | AAK26710.1 | EscJ | Virulence | LEE | Protein | 2e-33 | 43 |
| escJ | AAL57537.1 | EscJ | Virulence | LEE | Protein | 2e-33 | 43 |
| escJ | CAC81857.1 | EscJ protein | Virulence | LEE II | Protein | 2e-33 | 43 |
| escJ | CAI43879.1 | EscJ protein | Virulence | LEE | Protein | 2e-33 | 43 |
| escJ | YP_003223480.1 | T3SS structure protein EscJ | Virulence | LEE | Protein | 2e-33 | 43 |
| escJ | YP_003232148.1 | T3SS structure protein EscJ | Virulence | LEE | Protein | 2e-33 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ssaJ | NP_902258.1 | type III secretion system apparatus lipoprotein | VFG0510 | Protein | 2e-40 | 48 |
| ssaJ | NP_902258.1 | type III secretion system apparatus lipoprotein | VFG0817 | Protein | 3e-33 | 43 |
| ssaJ | NP_902258.1 | type III secretion system apparatus lipoprotein | VFG0725 | Protein | 3e-33 | 43 |
