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Name : cesD (CV_2578) Accession : NP_902248.1 Strain : Chromobacterium violaceum ATCC 12472 Genome accession: NC_005085 Putative virulence/resistance : Virulence Product : type III secretion system CesD protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG5010 EC number : - Position : 2782366 - 2782851 bp Length : 486 bp Strand : - Note : identified by sequence similarity; ORF located using GeneMark/Blastx/COG0457 DNA sequence : ATGACTGATATCCATCATCAGCCTGAGCAGACAGACGACGAGTTGTACCGGCATTTCTTCTCGCGCGGCGGCTCGTTGCG CTTGCTGGCCGACATTCAGGGCGAGGACCTGGAGTCGCTGTACGGCTATGCCAAGCAGCTGTTCGATGGCGGCGAAATCG CTGCCGCCCGAAATGTCTACCAGTTGCTGAGCACGCTGGACCACTGGAATTTCGACTACCTGCTGGCGCTGGGCCTGTGC CATCAGCGGCTCGGCGCGCACAACGAGGCCGTGGTCTGCTTCGGCCGCGCCGGCCTGATCAAGGTGGACGACCCGCGCGC CGCGTTCTACGCCGGCATCAGCTATCGGCTGGACGGGAATGCGGAGTATGCGAGCAAGGCTTTCAAGGCGGCCATCAACT GGTGCGGCGAACAAATCGATTATCAGGCAATCAAGGCCAGCGCCGTAGACATGCTGGCTCTGCAACAGGAGGAAGTACCA TGCTGA Protein sequence : MTDIHHQPEQTDDELYRHFFSRGGSLRLLADIQGEDLESLYGYAKQLFDGGEIAAARNVYQLLSTLDHWNFDYLLALGLC HQRLGAHNEAVVCFGRAGLIKVDDPRAAFYAGISYRLDGNAEYASKAFKAAINWCGEQIDYQAIKASAVDMLALQQEEVP C |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL06361.1 | CesD | Virulence | LEE | Protein | 2e-32 | 46 |
| cesD | AFO66407.1 | putative LEE-encoded type III secretion system chaperone | Virulence | SESS LEE | Protein | 5e-27 | 44 |
| cesD | AFO66326.1 | putative LEE-encoded type III secretion system chaperone | Virulence | SESS LEE | Protein | 5e-27 | 44 |
| cesD | YP_003236096.1 | chaperone CesD | Not tested | LEE | Protein | 5e-28 | 44 |
| cesD | AAC38376.1 | CesD | Virulence | LEE | Protein | 3e-28 | 44 |
| cesD | NP_290276.1 | hypothetical protein | Virulence | LEE | Protein | 5e-28 | 44 |
| cesD | AAC31521.1 | L0042 | Virulence | LEE | Protein | 3e-28 | 44 |
| ECs4576 | NP_312603.1 | CesD | Virulence | LEE | Protein | 5e-28 | 44 |
| cesD | ACU09466.1 | CesD protein | Virulence | LEE | Protein | 3e-28 | 44 |
| cesD | YP_003223483.1 | chaperone CesD | Not tested | LEE | Protein | 2e-31 | 44 |
| cesD | AAK26707.1 | CesD | Virulence | LEE | Protein | 1e-31 | 44 |
| cesD | YP_003232145.1 | T3SS chaperone CesD | Not tested | LEE | Protein | 2e-31 | 44 |
| cesD | AAL57534.1 | CesD | Virulence | LEE | Protein | 1e-31 | 44 |
| cesD | CAC81854.1 | CesD protein | Virulence | LEE II | Protein | 1e-31 | 44 |
| cesD | CAI43882.1 | CesD protein | Virulence | LEE | Protein | 1e-31 | 44 |
| sscA | AAC28880.1 | putative secretion chaperone | Virulence | SPI-2 | Protein | 2e-19 | 43 |
| sscA | CAA12186.1 | SscA | Virulence | SPI-2 | Protein | 2e-19 | 43 |
| SC1420 | YP_216407.1 | secretion system chaperone protein SscA | Virulence | SPI-2 | Protein | 5e-19 | 43 |
| sscA | NP_460364.1 | secretion system chaperone | Virulence | SPI-2 | Protein | 3e-19 | 43 |
| sscA | NP_456129.1 | putative Type III secretion system chaperone protein | Virulence | SPI-2 | Protein | 1e-18 | 42 |
| sscA | NP_805070.1 | type III secretion system chaperone protein | Virulence | SPI-2 | Protein | 1e-18 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| cesD | NP_902248.1 | type III secretion system CesD protein | VFG0722 | Protein | 1e-28 | 44 |
| cesD | NP_902248.1 | type III secretion system CesD protein | VFG0820 | Protein | 1e-28 | 44 |
| cesD | NP_902248.1 | type III secretion system CesD protein | VFG0500 | Protein | 1e-19 | 43 |
