|
Name : thiC (CV_0235) Accession : NP_899905.1 Strain : Chromobacterium violaceum ATCC 12472 Genome accession: NC_005085 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 243272 - 245170 bp Length : 1899 bp Strand : + Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGAACGCGCCCGTGAACAAGCAGATGGTGGTGGACGCCGCCGCCATCCAGCCCTTGCCCAATTCCCGCAAGATTTACGT CGAGGGCAGCCGCCCGGACATTCAAGTGCCGATGCGCGAGATCCGCCAGGCGGACACGCCGACCCAATTCGGCGGCGAAA AAAACCCTCCCATCTTCGTCTACGACACTAGCGGCCCGTATAGCGATCCGGCCGCCCGCATCGACATCCAGAGCGGCCTC GCGCCCTTGCGCGCCGCCTGGATCGCCCAGCGCGGCGATTGCGAGCAGCTCCCCGGCCTGTCCAGCGAATACGGCCGCGC CCGCGAGGCCGACCCCAAGCTCGCCGAGCTGCGCTTCAATCTGCAGCGCAAGCCGCGCCGCGCCAAGGCCGGCCGCAACG TGACGCAGATGCACTACGCCCGCCGCGGCATCGTCACGCCGGAGATGGAGTTCGTCGCCATCCGAGAGAACCTGAACCGC CGCGCCTACGTAGAGTCGCTGCAGGCCGCCGGCAACCGGCGCCTGCTGGACTTGATGACGCGCCAGCACCAGGGCCAGAG CTTCGGCGCCCATCTGCCCGAAGAGATCACGCCGGAGTTCGTGCGTGAGGAGATTGCCGCCGGCCGCGCCATCATCCCGG CCAACATCAATCACCCGGAAAGCGAACCGATGATCATCGGCCGCAACTTTCTGGTGAAAATCAACGGCAATATCGGCAAT AGCGCGGTAACGTCGTCGATATCCGAAGAAGTTGACAAGATGACCTGGGGCATCCGCTGGGGCGCGGACACCATCATGGA CCTGTCCACCGGCAAGAACATCCACGAAACGCGGGAGTGGATTCTGCGCAACAGCCCGGTGCCGATCGGCACCGTGCCCA TCTACCAGGCGCTGGAGAAGGTGAACGGCAAGGCCGAGGACCTGAGTTGGGAAATCTTCCGCGACACGCTGATCGAGCAG GCCGAGCAGGGCGTGGACTACTTCACCATCCACGCCGGCGTGCGCCTGGCTTACGTGCCGATGACCGCCAACCGCATGAC CGGCATCGTGTCGCGCGGCGGCTCCATCATGGCCAAGTGGTGTCTGGCGCATCACCGCGAGAACTTCCTCTACACCCACT TCGAGGACATCTGCGAAATCATGAAGGCCTACGACGTGGCCTTCAGCCTGGGCGACGGCCTGCGGCCGGGCAGCGCCTGG GACGCCAACGACGAGGCGCAGCTGTCGGAGTTGAAGACGCTGGGCGAGTTGACCGAGATCGCTTGGAAACACGATGTGCA AGTGATGATAGAAGGCCCGGGCCATGTGCCGATGCAGCTGATCAAGGAGAATATGGACAAGGAGCTGGAATGGTGCCGCG AAGCGCCGTTCTACACCCTGGGGCCGCTGACCACCGACATCGCGCCCGGCTACGACCACATCACTTCGGCCATCGGCGCG GCGCAGATCGGCTGGTACGGCACCGCGATGCTGTGCTACGTGACGCAGAAGGAACACCTGGGCCTGCCGAACAAGCACGA CGTGAAAGAGGGCATCATCACCTACAAGCTGGCGGCGCACGCGGCCGACCTGGCCAAGGGCCATCCCGGCGCGCAGATCC GCGACAACGCGCTGTCCAAGGCGCGCTTCGAATTCCGCTGGGAGGACCAGTTCAACCTGGGCCTGGACCCGGACAAGGCG CGCGACTTCCACGACGAGACCCTGCCCAAGGACAGCGCCAAGGTGGCGCACTTCTGCAGCATGTGCGGTCCGCACTTCTG CAGCATGAAGATCACCCAGGATGTGCGCGAGTACGCGGCCAGCCAGGGCGTAGGCGAGCAGGACGCGCTGCGGCTGGGCA TGCGGGAAAAGGCGATCGAATTCGTCAAGGGAGGCGGCAAGCTGTATGACAAGGTGTAA Protein sequence : MNAPVNKQMVVDAAAIQPLPNSRKIYVEGSRPDIQVPMREIRQADTPTQFGGEKNPPIFVYDTSGPYSDPAARIDIQSGL APLRAAWIAQRGDCEQLPGLSSEYGRAREADPKLAELRFNLQRKPRRAKAGRNVTQMHYARRGIVTPEMEFVAIRENLNR RAYVESLQAAGNRRLLDLMTRQHQGQSFGAHLPEEITPEFVREEIAAGRAIIPANINHPESEPMIIGRNFLVKINGNIGN SAVTSSISEEVDKMTWGIRWGADTIMDLSTGKNIHETREWILRNSPVPIGTVPIYQALEKVNGKAEDLSWEIFRDTLIEQ AEQGVDYFTIHAGVRLAYVPMTANRMTGIVSRGGSIMAKWCLAHHRENFLYTHFEDICEIMKAYDVAFSLGDGLRPGSAW DANDEAQLSELKTLGELTEIAWKHDVQVMIEGPGHVPMQLIKENMDKELEWCREAPFYTLGPLTTDIAPGYDHITSAIGA AQIGWYGTAMLCYVTQKEHLGLPNKHDVKEGIITYKLAAHAADLAKGHPGAQIRDNALSKARFEFRWEDQFNLGLDPDKA RDFHDETLPKDSAKVAHFCSMCGPHFCSMKITQDVREYAASQGVGEQDALRLGMREKAIEFVKGGGKLYDKV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 75 |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 74 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 74 |
