Gene Information

Name : fepC (CV_2234)
Accession : NP_901904.1
Strain : Chromobacterium violaceum ATCC 12472
Genome accession: NC_005085
Putative virulence/resistance : Virulence
Product : enterochelin ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 2419623 - 2420459 bp
Length : 837 bp
Strand : -
Note : identified by sequence similarity; ORF located using GeneMark/Blastx/COG1120

DNA sequence : 
GTGACCACCCTGTCCTTCAAGCTCAGCCCCGCCGCCGTTGATTCCGCCGCGCCCGTTGCAGGACTGCCGCGTCTCTCCGG
CGACAGCCTGCGGCTGGGCTACCGCGAACGTGTGATTTGCGAGCGGCTGGACCTGCGGATTCCCGACGGTTCCTTCACCG
TCGTCATCGGCCCCAACGGCTGCGGCAAATCCACGCTGCTGCGCAGCCTCAGCCGCCTGCTCAAGCCGCTGGACGGCCAG
GTGCGGCTGGACGGCCGCGACATCCACAGCCAGCCGGCCAAGACGGTGGCGCGCCAATTGGGCCTGCTGCCGCAAAGCGC
CGTCGCGCCCGACGGCGTCACCGTGGCCGACCTGGTGGCGCGCGGCCGCTACCCGCACCAGGGCCTGCTGCGGCAATGGA
GCCGCGACGACGAAGCCGCGGTCGACGAGGCGCTGAAAGCCACCGGCACCGCCGAACTGGCCGACCGGCTGGTGGACGAG
CTGTCCGGCGGCCAGCGCCAGCGCGCCTGGGTGGCGATGGCGCTGGCCCAGCAGACGCCGCTGCTGCTTTTGGACGAACC
CACCACCTACCTGGACATCGCCCACCAGATCGAACTCTTGGAGCTGTTCCGCACGCTCAACCGCGACGGCGGCCGCACGC
TGGTGGCGGTGCTGCACGACATCAACCACGCCTGCCGCTACGCCACCCACCTGATCGCGATGAAAGACGGCCGCATCGTC
GCCGAAGGCGCGCCGTCGCGCATCGTCAGCGCCGAGCTGATCGAGCAGGTATTCGGCCTGCCCTGCCTGATCATCGACGA
CCCGGTCAGCCATACGCCGATGGTAATTCCGCGCTGA

Protein sequence : 
MTTLSFKLSPAAVDSAAPVAGLPRLSGDSLRLGYRERVICERLDLRIPDGSFTVVIGPNGCGKSTLLRSLSRLLKPLDGQ
VRLDGRDIHSQPAKTVARQLGLLPQSAVAPDGVTVADLVARGRYPHQGLLRQWSRDDEAAVDEALKATGTAELADRLVDE
LSGGQRQRAWVAMALAQQTPLLLLDEPTTYLDIAHQIELLELFRTLNRDGGRTLVAVLHDINHACRYATHLIAMKDGRIV
AEGAPSRIVSAELIEQVFGLPCLIIDDPVSHTPMVIPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-59 51
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 4e-59 51
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 3e-59 51
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-59 51
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-54 49
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 8e-58 49
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 8e-58 49
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-43 46
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-46 46
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-47 45
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-47 45
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-47 45
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-47 45
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 1e-31 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepC NP_901904.1 enterochelin ABC transporter ATP-binding protein BAC0164 Protein 1e-43 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepC NP_901904.1 enterochelin ABC transporter ATP-binding protein VFG0925 Protein 5e-75 62
fepC NP_901904.1 enterochelin ABC transporter ATP-binding protein VFG1042 Protein 9e-44 46