|
Name : kdpB (CV_1598) Accession : NP_901268.1 Strain : Chromobacterium violaceum ATCC 12472 Genome accession: NC_005085 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase subunit B Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : - Position : 1722672 - 1724789 bp Length : 2118 bp Strand : - Note : identified by sequence similarity; ORF located using Glimmer/GeneMark/Blastx/COG2216/TC:3.A.3.7.1 DNA sequence : ATGAACGACAACAATCATTCCAAACCGCTGGCGGCGGCCCCCGACGCCGGCCACAAGAGCGCGAGCAAGTCGCTGCTCGA TCCGGCGCTGATGAAGCCCGCCATCGTCGACTCGTTCAGGAAGCTGTCGCCGCGCACCCAGTGGCGCAATCCGGTGATGT TCGTGGTGTACGCAGGCAGCATCCTGACCACCGCGCTGTGGATCCAGTCGCTGGGCGGCCACGGAGAGGCCCCGTCCGGC TTCATCCTGGCCGTGGCGCTGTGGCTGTGGTTCACCGTGCTGTTCGCCAACTTCGCCGAGGCGCTGGCCGAGGGCCGCAG CAAGGCCCAGGCCGCCAGCCTGCGCTCCGCCAAGAAGAACGTGGTGGCCAAGAAGCTGGCCGGCGGCAATCACGGCGCCG CCAAGAGCATCGTCGACGGCGCCACCTTGCGCAAAGGGGACTTCGTGCTGGTGGAGGCCGGCGACGTGATCCCGGTGGAC GGCGACGTGGTGGAAGGCGTGGCCTCGGTCGACGAATCCGCGATCACCGGCGAATCCGCGCCGGTGATCCGCGAGTCCGG CGGCGACTTCTCCTCCGTCACCGGCGGCACCCGCGTGCTGTCCGACTGGATCGTGGTCAAGATCACCGCCAACCCGGGCG AAACCTTCCTCGACCGCATGATCGCGATGGTGGAAGGCGCCAAGCGCCAGAAGACGCCGAACGAGATCGCGCTGACCATC CTCTTGGTGGCGCTGACCATCGTGTTCCTGATCGTCACCGTGACCCTGCTGCCGTTTTCGCTGTTCAGCGTGGACGCGGC CAAAGCCGGCACGCCGATCAGCATCACCACCCTGGTGGCGCTGCTGGTCTGCCTGATTCCGACCACCATCGGCGGCCTCT TGTCCGCCATCGGCGTGGCCGGCATGAGCCGGATGATGGGCGCCAACGTGATCGCCACCTCCGGCCGCGCGGTGGAAGCC GCCGGAGACGTCGACGTGCTGCTGCTGGACAAGACCGGCACCATCACGCTGGGCAACCGCCAGGCATCGGCTTTCATCCC GGCCCCGGGCGTATCGGAGAAAGACCTGGCCGACGCCGCCCAGCTGGCGTCCTTGGCCGACGAAACGCCGGAAGGCCGCA GCGTGGTGGTGCTGGCCAAGCAGAAATTCAACCTGCGCGAACGCCAGCTGGCCAGCCACGAGGCCGTGTTCATCCCGTTC ACCGCGCAGACCCGGATGTCCGGCATCGACTACGACGGCCGCCAGATCCGCAAGGGCGCCATCGACGCCATCCGCCGCCA CATCGCGGAACAAGGCGGCCAGTTCCCGGACGCGCTGGCGAAAAGCGCCGAGGACGTGGCGCGCCGCGGCTCCACCCCGC TGCTGGTGGCCGAAGGCGACCGCGCGCTGGGCGTGATCGAGCTGAAGGACATCGTCAAGGGCGGCATCAAGGAACGTTTC GCCGAGCTGCGCCAGATGGGCATCAAGACGGTGATGATCACCGGCGACAACCCGCTCACCGCCGCCGCCATCGCCGCCGA GGCCGGCGTGGACGACTACCTGGCCGAAGCCACGCCGGAAGCCAAGCTCAAGCTGATCCGCAGCCACCAGGCCGAAGGCA AGCTGGTGGCGATGACCGGCGACGGCACCAACGACGCGCCGGCGCTGGCCCAGGCCGACGTGGCGGTGGCGATGAACACC GGCACCCAGGCGGCCAAGGAAGCCGGCAATATGGTGGATCTAGACTCCAATCCCACCAAGCTGATCGAGATCGTCGAAAT CGGCAAGCAGATGCTGATGACGCGGGGCTCGCTGACCACCTTCTCCATCGCCAACGATGTGGCCAAGTACTTCGCCATCA TCCCGGCGGCGTTCGCCAGCACCTATCCGCAGCTGAACGCGCTGAACGTGATGGGCCTGAACAGCCCGGCCTCGGCCATC ATGTCGGCGGTGATCTTCAACGCCGTCATCATCGTGGCGCTGATTCCGCTGGCGCTGAAAGGCGTGAAATACCATGCCAG AAGCGCGGCCGAGCTGCTGCGCGGCAACCTGCTGGTCTACGGCCTGGGCGGCCTGTTGGTGCCCTTCGCCGGCATCAAGC TGATCGACATGCTGCTGGGCGCGATGGGCCTGGTGTAA Protein sequence : MNDNNHSKPLAAAPDAGHKSASKSLLDPALMKPAIVDSFRKLSPRTQWRNPVMFVVYAGSILTTALWIQSLGGHGEAPSG FILAVALWLWFTVLFANFAEALAEGRSKAQAASLRSAKKNVVAKKLAGGNHGAAKSIVDGATLRKGDFVLVEAGDVIPVD GDVVEGVASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVVKITANPGETFLDRMIAMVEGAKRQKTPNEIALTI LLVALTIVFLIVTVTLLPFSLFSVDAAKAGTPISITTLVALLVCLIPTTIGGLLSAIGVAGMSRMMGANVIATSGRAVEA AGDVDVLLLDKTGTITLGNRQASAFIPAPGVSEKDLADAAQLASLADETPEGRSVVVLAKQKFNLRERQLASHEAVFIPF TAQTRMSGIDYDGRQIRKGAIDAIRRHIAEQGGQFPDALAKSAEDVARRGSTPLLVAEGDRALGVIELKDIVKGGIKERF AELRQMGIKTVMITGDNPLTAAAIAAEAGVDDYLAEATPEAKLKLIRSHQAEGKLVAMTGDGTNDAPALAQADVAVAMNT GTQAAKEAGNMVDLDSNPTKLIEIVEIGKQMLMTRGSLTTFSIANDVAKYFAIIPAAFASTYPQLNALNVMGLNSPASAI MSAVIFNAVIIVALIPLALKGVKYHARSAAELLRGNLLVYGLGGLLVPFAGIKLIDMLLGAMGLV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 3e-173 | 64 |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 4e-173 | 64 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 4e-138 | 55 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 5e-138 | 55 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 5e-138 | 55 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 5e-138 | 55 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 5e-138 | 55 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 8e-139 | 55 |
