|
Name : CV_1210 (CV_1210) Accession : NP_900880.1 Strain : Chromobacterium violaceum ATCC 12472 Genome accession: NC_005085 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : R : General function prediction only COG ID : COG3596 EC number : - Position : 1273967 - 1274848 bp Length : 882 bp Strand : - Note : identified by sequence similarity; ORF located using GeneMark/Blastx/COG3596 DNA sequence : ATGATACCGCCTGCCTCACGGCAAGAACTGGCGCAGTGGCTGCAACAGCCCTTCCAGTCCCATGCCGGCGCATTCAGCGA CGAACAGCTGAACAAACTGCGCGAGCGCATCGAAGAGCTGGTGAATTACGAAGCCGCCGTTGGCTTGATGGGCAAAAGCG GCGCCGGCAAGTCCAGCCTATGCAATGCCCTGTTCGGGCAGGACGTGGCCGAAGTCGATGACGTGGCCCCCTGCACCGTC GGCGCTTCCGAATACACCCTGGCCTACCAGAACGGCAAAGGCATCTCGCTGATTGATCTACCCGGCGTCGGCGAACGCCA GGATAAGGAAGCCGCTTACGCCAAGCAGTATCAAGAGATGCTGCCGGAGCTGGATCTGGTGCTGTGGCTGATCAAAGCGG ATGATCGCGCGCTGAGCGTGGACGAGCAGTGCTATCAGCGCCTGATCCTGCCCTATCTGATCGAGCACGATATTCCGTTG CTATTCGTGGTGAATCAGGTAGACAAGATCGAGCCTTGCCGGGAGTGGGACTTCATCCACAGCATGCCCGGCCCGCAGCA GCGGACCAACATCAGCCGCAAGCAGATGCAGGTCAGCCAATTGTTCAACGTGCCATTGACCCAGATCTTCGTCACTTCCG CCGTGGAAGGCTACGGCCTGCAGATCCTGATCGAGCAAATCATCCATAGGCTGCCCAAAGAAAAAAAGTGGAGCGTCACG CGGGAGACCCGCGCCGAGTACGTGACGCCTTCCATGCAGCGGGAATCCATAGGTGGGCTCTGGGACACGATCAAGGAGGC CGCCAAGACGATCTTGCGCGAAACCTGGACCACGATCTCGCATCGCGTAGAAAGCTGGTTCAACAAACTGTTCAGTTGGT AG Protein sequence : MIPPASRQELAQWLQQPFQSHAGAFSDEQLNKLRERIEELVNYEAAVGLMGKSGAGKSSLCNALFGQDVAEVDDVAPCTV GASEYTLAYQNGKGISLIDLPGVGERQDKEAAYAKQYQEMLPELDLVLWLIKADDRALSVDEQCYQRLILPYLIEHDIPL LFVVNQVDKIEPCREWDFIHSMPGPQQRTNISRKQMQVSQLFNVPLTQIFVTSAVEGYGLQILIEQIIHRLPKEKKWSVT RETRAEYVTPSMQRESIGGLWDTIKEAAKTILRETWTTISHRVESWFNKLFSW |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sap | NP_708764.1 | hypothetical protein | Not tested | SHI-1 | Protein | 2e-34 | 45 |
| unnamed | AAL08471.1 | unknown | Not tested | SRL | Protein | 6e-35 | 45 |
| ECO103_3582 | YP_003223441.1 | hypothetical protein | Not tested | LEE | Protein | 1e-34 | 45 |
| unnamed | AAL99256.1 | unknown | Not tested | LEE | Protein | 4e-35 | 45 |
| Z1210 | NP_286745.1 | histone | Not tested | TAI | Protein | 9e-35 | 45 |
| Z1650 | NP_287153.1 | hypothetical protein | Not tested | TAI | Protein | 9e-35 | 45 |
| sap | NP_838477.1 | hypothetical protein | Not tested | SHI-1 | Protein | 5e-35 | 45 |
| unnamed | AAK00473.1 | unknown | Not tested | SHI-1 | Protein | 1e-34 | 45 |
| yeeP | ADD91709.1 | YeeP | Not tested | PAI-I AL862 | Protein | 9e-35 | 45 |
| APECO1_1093 | YP_853113.1 | hypothetical protein | Not tested | PAI IV APEC-O1 | Protein | 1e-33 | 45 |
| aec64 | AAW51747.1 | Aec64 | Not tested | AGI-3 | Protein | 9e-35 | 45 |
| unnamed | CAD66199.1 | hypothetical protein | Not tested | PAI III 536 | Protein | 7e-35 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CV_1210 | NP_900880.1 | hypothetical protein | VFG0654 | Protein | 8e-35 | 45 |
| CV_1210 | NP_900880.1 | hypothetical protein | VFG1062 | Protein | 3e-35 | 45 |
| CV_1210 | NP_900880.1 | hypothetical protein | VFG1674 | Protein | 4e-35 | 41 |
