Gene Information

Name : CV_1160 (CV_1160)
Accession : NP_900830.1
Strain : Chromobacterium violaceum ATCC 12472
Genome accession: NC_005085
Putative virulence/resistance : Virulence
Product : glycosyl transferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0463
EC number : -
Position : 1217846 - 1218853 bp
Length : 1008 bp
Strand : -
Note : identified by sequence similarity; ORF located using GeneMark/Blastx/COG0463/TC:9.B.32.1.3

DNA sequence :
ATGACCGACGCACGCAACTTCGTACCGCCCTACCTGCTGGAACTGCACGCCGCCGAACGGCCGGCCGACCCGCTGGTCAG
CTGCCTGATCCCGGCCTACAACGAGTCGGAAAACATCGTGCCGATGCTGGAGACGCTGCACCGGCTGCTGTCGGCGCACG
GCTATCGCCACGAACTGGTGGTGGTGGACGACGGCAGCCGCGACGACACCGTGCCCAAGGCGCTGGAAGCCGCCAAGCGG
CTGCCGGTGACGCTGATCCAGCTGTCGCGCAATTTCGGCAAGGAAATCGCGCTGACCGCCGGCATCGACAATATCGGCGG
CGATGTCGCGGTGCTGATAGACGGCGACTTCCAGCATCCGCCGGAAATGGTGCCGGTCTTCCTCGCCAAATGGCGCGAGG
GCTATGACATGGTCTACAGCGTGCGCGCCAACCGCGACGGCGAAACCCTGGCCAAGCGCGCGTTCACCCGCGTGTTCTAT
GCGCTGCTGAACAGCGGCGCGCCGCTGAAAATCCCGGAAAACACCCAGGATTTCCGGGTGCTGGACAAGAGCATCCTGGA
GGCGCTCAGGCGCATGCCGGAGCGCAACCGCTTCATGAAGGGCCTGTACAACTGGGTGGGCTTCACCCAGCTGGCGATGG
AGACGCAGACGCGGGAACGCCGCGCCGGCAAAAGCAGCTTCAATTTCCGCAGCCTGTTCAATCTGGGCCTGACCGGACTC
ACCGCCTTCTCCAACATGCCGCTGCGGATCTGGACCCTGGTCGGCTGCGTGATCTCGCTGCTGTCCATCGGCTACGCGAT
CTGGGAGCTGGTGCACACGCTGCTGTTCGGCAACCCGGTCAGCGGCTGGCCGACGCTGGCGGTCGCCGTCACCTTCCTCG
GCGGCGTGCAGCTGCTGTCCATCGGCATACTCGGCGAATACGTCGGCCGCATCTTCAACGAAGTCAAGGGCCGGCCTACC
TATTTGATCAGCCGCATCGCCAAACCCAGGGACGAGCGGGACGAATGA

Protein sequence :
MTDARNFVPPYLLELHAAERPADPLVSCLIPAYNESENIVPMLETLHRLLSAHGYRHELVVVDDGSRDDTVPKALEAAKR
LPVTLIQLSRNFGKEIALTAGIDNIGGDVAVLIDGDFQHPPEMVPVFLAKWREGYDMVYSVRANRDGETLAKRAFTRVFY
ALLNSGAPLKIPENTQDFRVLDKSILEALRRMPERNRFMKGLYNWVGFTQLAMETQTRERRAGKSSFNFRSLFNLGLTGL
TAFSNMPLRIWTLVGCVISLLSIGYAIWELVHTLLFGNPVSGWPTLAVAVTFLGGVQLLSIGILGEYVGRIFNEVKGRPT
YLISRIAKPRDERDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gtrBI AAF09026.1 GtrBI Not tested SHI-O Protein 4e-55 43
ESA_03027 YP_001439092.1 hypothetical protein Not tested Not named Protein 2e-55 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CV_1160 NP_900830.1 glycosyl transferase VFG0670 Protein 3e-56 44