Gene Information

Name : glnA (PMM0920)
Accession : NP_893038.1
Strain : Prochlorococcus marinus CCMP1986
Genome accession: NC_005072
Putative virulence/resistance : Virulence
Product : glutamine synthetase, glutamate--ammonia ligase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : 6.3.1.2
Position : 881367 - 882788 bp
Length : 1422 bp
Strand : +
Note : -

DNA sequence :
ATGGCCAAGTCTCCCCAAGACGTTTTAAGTCAGATTAAGGATGAAGGAATTGAACTCATCGATCTAAAATTCACTGACAT
TCATGGTAAATGGCAACATCTAACCTTGACATCTGACATGATTGAGGAAGAATCATTCACTGAAGGTCTTGCCTTTGATG
GATCATCTATAAGAGGTTGGAAAGCGATTAACGCATCTGACATGTCTATGGTTCCAGATTCAAGTACCGCATGGATAGAT
CCTTTTTATAAACATAAAACCTTAAGCATGATTTGCTCTATTCAAGAGCCAAGAAGTGGAGAACCCTATAATAGGTGCCC
AAGATCATTAGCTCAAAAGGCATTAAAATATTTAGATTCCACAGGTATAGCGGATACTGCATTTTTTGGACCAGAGCCAG
AATTCTTCTTATTCGATGATGTTAGATATGACTCTAAAGAAGGAAGTTGTTTTTATAGTGTAGATACTATTGAAGCTCCC
TGGAATACTGGTCGAACAGAAGAAGGTGGAAACCTAGGTTATAAAATTCAATACAAAGAGGGCTATTTCCCTGTTGCTCC
TAATGACACCGCACAAGACATAAGGTCTGAAATGTTATTGCAAATGGCTGAATTAGGAATTCCAACTGAGAAGCATCATC
ATGAAGTCGCTGGAGCAGGACAACATGAACTTGGTATAAAATTTGATTCCTTAATTAGCTCCGCTGATAGTGTTATGACA
TACAAATATGTTGTAAGAAACGTAGCCAAAAAATATGGGAAAACAGCAACATTTATGCCTAAACCTGTATTTAACGATAA
TGGAACAGGCATGCATGTTCATCAGAGTTTATGGGAAAGTGGTCAACCTCTATTCTATGGCGAAGGATCATATGCAAATC
TATCTCAGACAGCAAGGTGGTATATCGGAGGTATTTTAAAACACGCTCCATCATTCCTAGCATTTACTAATCCAACAACT
AATAGCTATAAAAGATTAATTCCAGGTTTTGAAGCTCCGGTAAATCTAGTTTACTCAGAGGGTAATAGATCAGCAGCTGT
AAGAATCCCTTTAACTGGACCTAATCCAAAAGCTAAAAGATTAGAATTTAGATCAGGTGATGCACTTGCTAACCCTTATT
TAGCATTTTCTGTAATGATGCTAGCTGGTATTGATGGTATTAAGAATCAAATTGATCCTGGTGATGGAGTTGATGTTGAC
TTATTTGAATTACCAGCAGAAGAGCTATCAAAAATAGATACAGTTCCGTCATCTCTTAACGATTCACTAAATGCACTTAA
AGCAGATAAAGATTATTTATTAGCTGGAGGGGTATTCACAGAAGATTTTATTGATAATTTTATCGATATGAAGTACGAAG
AGGTTCAACAATTAAGGCAGAGGCCCCACCCTCATGAATTTTTTATGTACTATGACGCTTAA

Protein sequence :
MAKSPQDVLSQIKDEGIELIDLKFTDIHGKWQHLTLTSDMIEEESFTEGLAFDGSSIRGWKAINASDMSMVPDSSTAWID
PFYKHKTLSMICSIQEPRSGEPYNRCPRSLAQKALKYLDSTGIADTAFFGPEPEFFLFDDVRYDSKEGSCFYSVDTIEAP
WNTGRTEEGGNLGYKIQYKEGYFPVAPNDTAQDIRSEMLLQMAELGIPTEKHHHEVAGAGQHELGIKFDSLISSADSVMT
YKYVVRNVAKKYGKTATFMPKPVFNDNGTGMHVHQSLWESGQPLFYGEGSYANLSQTARWYIGGILKHAPSFLAFTNPTT
NSYKRLIPGFEAPVNLVYSEGNRSAAVRIPLTGPNPKAKRLEFRSGDALANPYLAFSVMMLAGIDGIKNQIDPGDGVDVD
LFELPAEELSKIDTVPSSLNDSLNALKADKDYLLAGGVFTEDFIDNFIDMKYEEVQQLRQRPHPHEFFMYYDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 3e-98 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA NP_893038.1 glutamine synthetase, glutamate--ammonia ligase VFG1399 Protein 2e-123 56