Gene Information

Name : PMM0602 (PMM0602)
Accession : NP_892720.1
Strain : Prochlorococcus marinus CCMP1986
Genome accession: NC_005072
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 572019 - 572783 bp
Length : 765 bp
Strand : +
Note : -

DNA sequence : 
ATGGATGAACTTAATTATAAAAATTATAGAATTGAGGCAGAAAATATCTGTGTTGATTATCACGGAAAAGTTGCCTTATA
TGATGCGAATTTAAAATTAAAGGCCGGACAAATTTGTGGATTAGTAGGAATGAATGGTGCGGGGAAAACAACTTTTTTTA
ATGCCTTAACTGGTTTTGTAAATATCTCAAAAGGTAAAATAAGAATAAATGGTGAGTCTTTAAGAATTGCTCAACAAGAT
CAGTCAATTGCATATGTTCCTCAAAGTGAAGGAATTGATAGTCAATTTCCAGTAAGTGTGTGGGATGTTGTAATGATGGG
TCGATATGGGTCAATGAATATTCTGAGATCGCCAAGAGAATCAGATATTCAAGCTGTTAAGGATGCTATAGAAAGAGTTG
ATCTTATGGAACTTTCATCTACCCCAATTGGCAATTTATCTGGGGGGCAAAGGAAAAGAACTTTTTTAGCAAGAGCTATT
GCACAACGGGCATCAATACTATTACTTGATGAACCCTTCGCGGGAGTTGATATTAGAACTGAGAAACTTATCTCAGAATT
ATTTATGCAATTTAAAAATGAGGGAAAAACAATTTTGCTATCTACTCATGATATGATTCATGTTCGTGAATTTTGTGATT
TAGTTCTTTTAATAAATAAGACAGTTGTTGCATATGGAGAGACTTCGGAAGTATTTACCCCAGAAAATATTACAAGTACT
TTTGGAGGGATGTCGCCAGATGTCTTGTTTGGACCTGAATCTTAA

Protein sequence : 
MDELNYKNYRIEAENICVDYHGKVALYDANLKLKAGQICGLVGMNGAGKTTFFNALTGFVNISKGKIRINGESLRIAQQD
QSIAYVPQSEGIDSQFPVSVWDVVMMGRYGSMNILRSPRESDIQAVKDAIERVDLMELSSTPIGNLSGGQRKRTFLARAI
AQRASILLLDEPFAGVDIRTEKLISELFMQFKNEGKTILLSTHDMIHVREFCDLVLLINKTVVAYGETSEVFTPENITST
FGGMSPDVLFGPES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 9e-50 49
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 7e-50 49
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-49 49
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 1e-49 49
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 1e-49 49

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PMM0602 NP_892720.1 ABC transporter ATP-binding protein BAC0440 Protein 9e-56 52
PMM0602 NP_892720.1 ABC transporter ATP-binding protein BAC0350 Protein 4e-50 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PMM0602 NP_892720.1 ABC transporter ATP-binding protein VFG0526 Protein 4e-50 49