Gene Information

Name : PMM0601 (PMM0601)
Accession : NP_892719.1
Strain : Prochlorococcus marinus CCMP1986
Genome accession: NC_005072
Putative virulence/resistance : Virulence
Product : ABC transporter substrate-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 571112 - 572014 bp
Length : 903 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAAAAAAGTTATTGCACTTTGTATTTTCTTTTCTAATATGTGTTAGTGCAAATTCATGCAAAAGGACTTCTTTTGA
AAAAGAAACTAACAAAGAAGTAATTTTGGCTAGTTTTACAGTCCTGGCAGATATTATTGAAAATGTTGCTAAAGATGAGT
TTTCTGTTAAATCAATTACTAAACCAGGAGTTGAAGTTCATGGTTATCAGCCAACTCCAAGTGATCTTATAAAAGCTTCC
AAAGCCGATGTTTTTATTGATAATGGATTTGGATTTGAATTATGGGCTGAGAAATTTGTTTCAAACTTACAAATTAAGAG
AGTAACTATTTCAAATAGATTAGAACCAATTTTTATAAGTGAAGATTTCTATAAAGGTAAACCTAATCCTCATGCGTGGA
TTTCTCCTAAAAGGGGAATGATTTATGTAAATGTTATCGTTGATTCTTTATCAGAATTAAAACCATCGAAAGCAGAATCA
TTTAAAAATAACGGACAAATTTACAAGAATAAAATCGCTAAAATAGATAAAGATTTTTCACTTTTTATTAATAATCTTAA
GAAAAATAATAGGTATCTAGTAACTTGTGAAGGGGCATTCTCTTATCTCACAAATGATTACGGATTAAAAGAAGCTTACT
TATGGCCAGTTAATGCTGAAAGTCAAATTACACCGAAAAGAATGGCAAGTACAATTTCTTTGGTAAAAAATAAAAATATC
CCATCGGTCTTTTGTGAAAGCACTGTAAGTAATGAATCACAAATGGTTGTTGCCAGTGAAACAGGAGCAAAGTTTGGGGG
AGATCTTTTTGTTGATTCGCTTTCTCAAGATAATAAGAGTGCTAATACTTATTTAAAAATGCTTCAACATAATTTGACTC
TTATTAAAAAAGGCCTCAATTAA

Protein sequence : 
MKKKLLHFVFSFLICVSANSCKRTSFEKETNKEVILASFTVLADIIENVAKDEFSVKSITKPGVEVHGYQPTPSDLIKAS
KADVFIDNGFGFELWAEKFVSNLQIKRVTISNRLEPIFISEDFYKGKPNPHAWISPKRGMIYVNVIVDSLSELKPSKAES
FKNNGQIYKNKIAKIDKDFSLFINNLKKNNRYLVTCEGAFSYLTNDYGLKEAYLWPVNAESQITPKRMASTISLVKNKNI
PSVFCESTVSNESQMVVASETGAKFGGDLFVDSLSQDNKSANTYLKMLQHNLTLIKKGLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 5e-54 43
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 5e-54 43
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 4e-54 43
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 5e-54 43
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 5e-54 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PMM0601 NP_892719.1 ABC transporter substrate-binding protein BAC0349 Protein 2e-54 43
PMM0601 NP_892719.1 ABC transporter substrate-binding protein BAC0439 Protein 1e-53 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PMM0601 NP_892719.1 ABC transporter substrate-binding protein VFG0525 Protein 2e-54 43