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Name : dnaB (PMM1674) Accession : NP_893791.1 Strain : Prochlorococcus marinus CCMP1986 Genome accession: NC_005072 Putative virulence/resistance : Unknown Product : DnaB replicative helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 1606266 - 1607648 bp Length : 1383 bp Strand : + Note : similar to Nostoc sp. PCC7120 (Q8YZA1|DNAB_ANASP) dnaB and Synechocystis sp. PCC6803 (Q55418|DNAB_SYNY3) dnaB but does NOT contain an intein. DNA sequence : ATGGTTTCAGTTCCTTTTTCAAATAATGGGTCTAATAAGAATTTTAAAAAGGACTTTAATAATGAAAACGCTGGTTTAGT TCCTCCCCAAAATATTCAAGCAGAAGAAGCTGTTTTAGGTGGAATTTTACTTGATCCTGATGCGATAGGAAGGATTGCAG ACTTGATTAAACCAGAAGCCTTTTATATAAATGCTCATCAAGAGATATATAAAACCGCGTTAATGTTGCATACACAAGGC AAACCTACAGATCTAACTTCAATGAGTGCATGGCTTGCTGACAATGGATCACTTGAAAAGATTGGAGGCAATTCTAAATT AGTAGAACTTGTAGAAAATGTTTCTTCAACAGCTTCAATAGAACAAGTTGCTAATTTAATTAGTGATAAATTTATAAGGA GACAACTCATCCGATCTGGGAATGAGGTTGTTCAACTAGGATTTGATCAAACACAAGAAACCAATGAAGTTTTAGATAAG GCAGAACAGAAAATTTTTGAAATTAGTCAAGAAAAACCGACAAAAGGTCTGACCCAAGCGGCAGAAATTCTTACAAGTAC TTTTAATGAAATAGAGTCCAGATCATTAGGAACATCTGTAGCTGGTATTCCAGTAAATTTTTATGACCTTGACGCAATGA CTCAAGGCTTTCAAAGGAGTGATCTAATAATTGTGGCAGGAAGACCCTCAATGGGAAAAACTTCAATGGTTTTAAACCTA GCAAAAAATGTAGCTCAATCTCAGGATCTTCCAGTTTGTGTATTTAGCCTTGAGATGAGCAAAGAACAACTTACATATAG ATTACTTTCTATGGAAGTAGGTATAGAAAGCGGAAGATTAAGAACCGGAAGACTACAACAAGAAGAATGGCCTTTACTTG GAGAAGGAATTAACTCTTTAGGTCAACTGCCAATTTTTATTGATGATAAGCCTAATTTAAGTGTTTTAGAAATGAGGTCT CTATGCAGAAGATTAATAGCTGAGCAGAAAAAAGAACTTGGTTTAATAGTTATTGACTACTTACAACTAATGGAGGGTAC AACACCTGATAACAGAGTTCAAGAGCTATCTCGTATCACTAGAGGTCTCAAAAGTATGGCAAGAGAGTTAAAAGTACCAG TAGTTGCTTTATCTCAATTAAGTAGAGGAGTTGAATCAAGAACAAATAAAAGACCTATGTTAAGTGACCTTAGAGAATCC GGATCTATAGAACAAGATGCCGACTTAGTATTAATGATTTACAGAGATGAGTATTACAATCCAGAAACTGAAGACAGAGG AATAACTGAAATTATTGTCACGAAACACAGAAACGGCCCTGTTGGAACTGTTAAATTATTATTTGAACCCCAATTTACAA GATTTAGAAACTTAGCCAACTAA Protein sequence : MVSVPFSNNGSNKNFKKDFNNENAGLVPPQNIQAEEAVLGGILLDPDAIGRIADLIKPEAFYINAHQEIYKTALMLHTQG KPTDLTSMSAWLADNGSLEKIGGNSKLVELVENVSSTASIEQVANLISDKFIRRQLIRSGNEVVQLGFDQTQETNEVLDK AEQKIFEISQEKPTKGLTQAAEILTSTFNEIESRSLGTSVAGIPVNFYDLDAMTQGFQRSDLIIVAGRPSMGKTSMVLNL AKNVAQSQDLPVCVFSLEMSKEQLTYRLLSMEVGIESGRLRTGRLQQEEWPLLGEGINSLGQLPIFIDDKPNLSVLEMRS LCRRLIAEQKKELGLIVIDYLQLMEGTTPDNRVQELSRITRGLKSMARELKVPVVALSQLSRGVESRTNKRPMLSDLRES GSIEQDADLVLMIYRDEYYNPETEDRGITEIIVTKHRNGPVGTVKLLFEPQFTRFRNLAN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 2e-73 | 41 |
