Gene Information

Name : pykF (PMT0679)
Accession : NP_894511.1
Strain : Prochlorococcus marinus MIT 9313
Genome accession: NC_005071
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 735528 - 737345 bp
Length : 1818 bp
Strand : -
Note : catalyzes the formation of phosphoenolpyruvate from pyruvate

DNA sequence :
ATGGTAGTTTCCGCGATGTTTCAGGTCCCGTTGATGGCCCAGATTGATCTGACACGACGGACCAAAATTGTTGCCACCAT
AGGTCCGGCAACCGAGAGCGCCGAACGAATCCGAGAACTCGTTGAGGTAGGTGCTACCACCTTCCGGCTGAATTTCTCAC
ACGGCGACCATGACGAGCACGCCAAGCGCATCTCCACCATCCGTCAGGTTTCTGATGAATTGGGAATGCACATCGGCATT
CTTCAAGACTTGCAAGGCCCCAAAATTCGCCTGGGTCGTTTTGATAAGGGGCCTATCACTCTGGCCAATGGCGATTCCTT
CGCACTGACCTCCAAACAAGTTCAATGCAATCAGTCAGTGGCAACCGTCACTTACGACAAGCTTGCAGACGAAGTCACGA
CCGGCAGCCGAATCTTGCTTGATGACGGTCGAGTGGAGATGAAAGTCTTAAAAATCGATCAAAGCGAACAAACCTTGCAC
TGCATCGTCACGGTGGGAGGGGTGCTCTCAAATAACAAGGGAGTGAATTTCCCTGATGTACAGCTTTCGGTTCGCGCCCT
TACAGAGAAAGATCGCCAAGATCTCGCCTTTGGCCTCCAGCAAGGGGTGGACTGGGTCGCACTGAGCTTTGTGCGAAACC
CTTCGGACATGAAAGAGATCCGCAAACTCATCCGCGATCATGGGCACAGCACCCCAGTGATCGCGAAGATCGAGAAATTT
GAGGCGATTGATCAAATCGATTCAATCCTTCCTCTCTGTGATGGAGTCATGGTTGCAAGGGGGGACTTAGGCGTTGAGAT
GCCAGCCGAAGAAGTGCCTCTACTGCAAAAGGATTTGATTCGCAAGGCCAACAGCCTTGGAATTCCAATCATCACAGCCA
CCCAGATGCTCGACTCGATGGCCTCAAGCCCGAGGCCCACCAGAGCAGAAGTCAGTGATGTAGCAAATGCGATCCTTGAT
GGTACTGATGCAGTGATGCTCTCGAACGAAACCGCTGTAGGAGACTATCCAGTGGAGGCGGTTCAAACGATGGCCACCAT
TGCCAGACGGATTGAACGGGACTATCCACAGCGTCCAATCGAAACTTATCTAGCCAGCACCATTTCCAACGCGATTAGTT
CAGCCGTAAGCAGCATCGCCAGTCATCTCAACGCGGCAGCAATCGTGCCACTAACTGAAAGTGGTGCAACTGCTCACAAC
GTCAGTAAATTCCGCCCAGCAGCGCCAATTTTGGCCGTAACCAACAAATTGGCTGTAGCAAGAAAACTTCAATTGGCATG
GGGTGTTACCCCACTGCTTGTCCCAACCCAAAAAAGTACCACTGCAACCTTCAGTGATGCAATTGCTGTTGCCCAGGAAT
TGGGTCTTCTCAAAGAAGGAGATCTAACAATTCAAACTGCAGGAACCCTTGCTGGCGTGAGCGGGTCCACAGATCTTGTC
AAAGTAGGAATTGTCAGTGCAGTACTTGGCCAAGGGATCGGTATTGGCAATGGAACCGTTAGCGGCAAGGTCAGATTTGC
TTTCTCCCCAAACGACTCAACAAAAATTGAACCAGGCGAGATTCTGGTCATTCATGAAACAAGCGATGACTATCTCGATG
CAATCAGAAAGTCTGCAGGAGTGATTACAGAACAAGAAGGAGAGGAATACCACGCAGAAATGATCTCAAAACGACTAGGG
ATTCCGTTCATCATTGGGATAGCACATGCCACGAGAAACCTGCTTGAAGGAGAGGTGGTAACAATGCAGCTCAGTAATGG
CAAAGTTCATCGCGGCACAGGCGGCAAGCTGCCAATGAAGCTCGACTCAATGGACTGA

Protein sequence :
MVVSAMFQVPLMAQIDLTRRTKIVATIGPATESAERIRELVEVGATTFRLNFSHGDHDEHAKRISTIRQVSDELGMHIGI
LQDLQGPKIRLGRFDKGPITLANGDSFALTSKQVQCNQSVATVTYDKLADEVTTGSRILLDDGRVEMKVLKIDQSEQTLH
CIVTVGGVLSNNKGVNFPDVQLSVRALTEKDRQDLAFGLQQGVDWVALSFVRNPSDMKEIRKLIRDHGHSTPVIAKIEKF
EAIDQIDSILPLCDGVMVARGDLGVEMPAEEVPLLQKDLIRKANSLGIPIITATQMLDSMASSPRPTRAEVSDVANAILD
GTDAVMLSNETAVGDYPVEAVQTMATIARRIERDYPQRPIETYLASTISNAISSAVSSIASHLNAAAIVPLTESGATAHN
VSKFRPAAPILAVTNKLAVARKLQLAWGVTPLLVPTQKSTTATFSDAIAVAQELGLLKEGDLTIQTAGTLAGVSGSTDLV
KVGIVSAVLGQGIGIGNGTVSGKVRFAFSPNDSTKIEPGEILVIHETSDDYLDAIRKSAGVITEQEGEEYHAEMISKRLG
IPFIIGIAHATRNLLEGEVVTMQLSNGKVHRGTGGKLPMKLDSMD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 1e-77 44
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 1e-77 44
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 1e-77 44
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 1e-77 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pykF NP_894511.1 pyruvate kinase VFG0479 Protein 4e-78 44