Gene Information

Name : glnA (PMT0601)
Accession : NP_894434.1
Strain : Prochlorococcus marinus MIT 9313
Genome accession: NC_005071
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : 6.3.1.2
Position : 657545 - 658966 bp
Length : 1422 bp
Strand : +
Note : -

DNA sequence :
ATGGGCAAATCACCCCAAGACGTCCTCCGCCAGATCAAGGACGAGGGCATTGAACTGATTGACCTCAAGTTCACTGATCT
GCACGGCAAGTGGCAGCATCTCACCGTTTGTTCGGATTTGATTGATGAGGAAGCCTTTGCGAATGGCTTGGCTTTCGATG
GATCTTCCATCCGTGGATGGAAGGCCATTAACGAATCAGATATGGATATGGTGCCCGACGCCAGTACGGCCTGGATCGAC
CCCTTTTATCGCCACAAGACTCTTAGCTTGATCTGTTCCATTCGGGAACCTCGTAGTGGTGAGCCCTATGCCAGATGCCC
CAGGGCGCTTGCCCAAAAAGCCCTCGGTTACTTAGCCGGCACCGGCCTGGCCGATACTGCTTTTTTCGGCCCTGAGCCAG
AGTTTTTCATCTTTGACGACGTCCGCTACAACTCTGGCGAAGGTGGTTGCTTCTACAGCGTTGACACGATTGAGGCCCCT
TGGAATAGCGGTCGCATTGAAGAAGGCGGCAACCTTGCCTACAAGATCCAACTGAAAGAGGGCTACTTTCCGGTTCCACC
CAACGACACCGCCCAGGACATCCGTTCCGAAATGCTGCTGCTGATGGGGCAATTAGGAATCCCGATGGAGAAGCACCACC
ATGAAGTTGCAGGTGCTGGCCAACATGAATTGGGGATGAAGTTCGCTGAGCTGATTGAAGCTGCGGACAACGTGATGATT
TACAAGTACATCGTCAGGAATGTTGCACGTAAATACGGCAAAACGGCAACATTTATGCCCAAGCCGGTGTTCAACGACAA
CGGCACCGGGATGCATGTTCACCAGAGCCTCTTTAAAGGAGGCCAACCCCTGTTCTTTGGAGAAGGCACCTACGCCAACT
TGTCACAGACGGCTCGCTGGTATATCGGCGGCATCCTTAAGCATGCTCCCTCCTTCCTGGCTTTCACAAACCCCACAACC
AATAGCTACAAGCGTTTGGTGCCAGGTTTTGAAGCTCCTGTAAACCTTGTTTATTCTCAGGGCAATAGGTCTGCAGCTGT
TCGCATTCCGCTCACTGGCCCAAACCCGAAAGCTAAGCGTCTTGAATTCCGCCCAGGCGATGCCTTGGCCAATCCTTATC
TAGCTTTCAGCGCAATGATGATGGCGGGCGTTGACGGCATTAAAAACCAAATTGACCCTGGCGATGGTTTCGATGAGGAT
CTATTTGAACTACCAGAAGAACGCCTTGCCAGCATCCCCACAGTGCCAGCTTCACTTAATGGTGCACTCGAAGCGTTAAA
TGCAGACAAGAACTACCTCATGGAAGGGGGAGTCTTCACTGAAGACTTCATTGACAACTGGATTGACATCAAATACGAAG
AGGTGCAGCAATTGCGTCAACGGCCTCATCCCCATGAGTTCACCATGTATTACGACGCATGA

Protein sequence :
MGKSPQDVLRQIKDEGIELIDLKFTDLHGKWQHLTVCSDLIDEEAFANGLAFDGSSIRGWKAINESDMDMVPDASTAWID
PFYRHKTLSLICSIREPRSGEPYARCPRALAQKALGYLAGTGLADTAFFGPEPEFFIFDDVRYNSGEGGCFYSVDTIEAP
WNSGRIEEGGNLAYKIQLKEGYFPVPPNDTAQDIRSEMLLLMGQLGIPMEKHHHEVAGAGQHELGMKFAELIEAADNVMI
YKYIVRNVARKYGKTATFMPKPVFNDNGTGMHVHQSLFKGGQPLFFGEGTYANLSQTARWYIGGILKHAPSFLAFTNPTT
NSYKRLVPGFEAPVNLVYSQGNRSAAVRIPLTGPNPKAKRLEFRPGDALANPYLAFSAMMMAGVDGIKNQIDPGDGFDED
LFELPEERLASIPTVPASLNGALEALNADKNYLMEGGVFTEDFIDNWIDIKYEEVQQLRQRPHPHEFTMYYDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 5e-96 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA NP_894434.1 glutamine synthetase VFG1399 Protein 8e-125 56