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Name : clpB1 (PMT0449) Accession : NP_894282.1 Strain : Prochlorococcus marinus MIT 9313 Genome accession: NC_005071 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 506406 - 509003 bp Length : 2598 bp Strand : + Note : - DNA sequence : ATGCAACCTACAGCGGATCAATTTACCGAAAAAGGCTGGGCAGCAATCGTTTTGGCCCAACAACTTGCCCAACAACGCAA GCACCAGCAACTGGAAACAGAGCATTTGTTGTTGTCACTGCTCCAGCAAAACGCTTTGGCCGGAAGAATCCTGGAAAAAG CAGGTGTGTCGATCGGCAACTTGCAAACAGCCGTGGAGGCACACCTGCAAGAACAGCCCACTATGCAGGCTGCGCCAGAC TCTGTCTATCTGGGCAAGGGAGTCAATGATCTTCTCGATCAAGCTGAGAAACATAAGCAAGCTTTTGGCGATAGTTTCAT CTCGATTGAACATCTGTTACTTGCATTGGCCGGGGACAATCGTTGCGGCCGTAAGTTGCTCAATCAAGCGGGCGTGGATG CCGGCAAACTAAAGGTTGCAATTGACGCGGTACGCGGAAACCAGAAGGTGACCGATCAGAACCCAGAAGGAACTTACGAA TCTCTCGAAAAATATGGCAGAGACCTGAGTGCTGCTGCTCGCGAAGGCAAACTCGACCCTGTCATCGGAAGGGACGATGA GATTCGACGCACGATTCAGATTCTTAGTAGGCGCACCAAAAACAACCCTGTCCTCATTGGGGAGCCAGGGGTGGGAAAAA CCGCAATTGTTGAAGGCCTCGCACAGCGGATTGTTAATGGCGATGTACCTGCAGCCCTTCAGAACAGACAGTTAATCACC CTTGATATGGGTGCTTTGATTGCAGGGGCGAAATATCGAGGTGAATTCGAAGAGCGACTCAAGGCGGTGCTCAAAGAAGT TACCGCCTCTGAAGGACAAATCGTACTTTTTATTGATGAAATCCATACTGTTGTAGGAGCTGGAGCGACCGGTGGGGCAA TGGATGCCAGCAATCTGCTTAAGCCAATGCTGGCTCGAGGGGAACTGCGCTGCATTGGTGCAACGACCCTCGATGAGCAC CGACAGCACATCGAAAAAGACCCCGCTTTAGAAAGAAGATTCCAACAAGTGCTTGTGGATCAACCCACAGTGCAAGACAC GATCTCCATCCTGCGTGGTCTCAAAGAACGCTACGAAGTGCATCATGGTGTGCGCATTGCTGATAACGCCCTAGTTGCTG CAGCTGTGCTCAGTAGCCGATATATTGCCGATCGCTTTTTGCCAGATAAAGCCATCGATTTGATGGATGAATCTGCTGCA CGGCTGAAAATGGAAATCACTTCCAAGCCTGAGGAAATTGATGAAATCGATCGCAAGATTGTGCAGCTCGAGATGGAGAA GCTTTCCCTAGGACGTGAGTCCGACTCCGTTAGCAAGGAAAGGTTGGAAAAACTAGAACGCGAACTTGCTGAATTAGCAG AGCAACAAAGTGCCCTCAATGCACAGTGGCAACAAGAAAAAGGTGCGATTGACGACCTTTCTTCGCTCAAAGAAGAAATC GAACGGGTGCAATTGCAAGTGGAGCAAGCCAAGCGCAGCTACGACCTCAACAAGGCAGCTGAACTGGAGTATGGAACTCT GGCGGGATTGCAGAAACAACTCAGCGAGAAAGAAACTGCCCTGGCCCAAGATGGAGAGGCAGGCGATAAATCACTGCTGC GAGAGGAGGTTACGGAAGATGATATTGCTGATGTCATCGCTAAATGGACCGGGATTCCCGTCGCCAAGCTTGTGCAGTCG GAAATGGAAAAGCTGCTTGGACTTGAAGCAGAACTCCACCAACGTGTGATTGGCCAAGAACAGGCTGTGCAAGCTGTTGC GGATGCGATTCAGCGTTCTAGGGCAGGTTTAAGTGATCCCAACCGCCCGATCGCAAGTTTTTTATTTCTAGGCCCCACTG GTGTCGGTAAAACGGAGCTATCCAAGGCATTGGCCTCTCAACTGTTTGACAGCGAGGCGGCTTTGGTTCGAATCGATATG TCTGAGTATATGGAGAAGCACAGTGTCAGCAGACTGATTGGGGCCCCTCCGGGTTATGTGGGCTATGAGGCCGGTGGACA GCTCACCGAAGCCGTACGCAGACGCCCTTATGCGGTAATCCTGTTCGATGAAGTGGAGAAGGCACACCAAGATGTGTTCA ATGTGATGTTACAGATCCTTGATGATGGACGTGTCACCGATGGTCAGGGTCGCACAGTTGATTTTACAAATACGGTGCTA ATTCTTACCAGTAATATTGGCAGCCAGTCGATTCTCGACTTGGGAGGCGATGATAGTCAATACAGGGAAATGGAGCGGCG AGTTCATGATGCTTTGCACGCTCATTTTAGGCCTGAGTTTCTCAACCGCCTGGATGAAACAATCATCTTTCATAGTCTCA GGCGCGAGGAACTGCGTCAGATCGTTGCCCTTCAGGTCAATCGGCTGCGTGAGCGTCTTTGCGATCGCAAGCTTGGCCTA GAGATCAGTGATACAGCAGCTGATTGGCTCGCCAATGCTGGCTATGACCCTGTTTATGGGGCTAGACCCCTTAAGCGAGC GATACAACGCGAGCTTGAAACTCCAATAGCCAAAAGTATCCTGGCGGGCCTTTATGGAGATAGTCAGATTGTGCATGTGG ATGTGGATGTGGATCAGGAGCGTCTGAGTTTTCGCTAA Protein sequence : MQPTADQFTEKGWAAIVLAQQLAQQRKHQQLETEHLLLSLLQQNALAGRILEKAGVSIGNLQTAVEAHLQEQPTMQAAPD SVYLGKGVNDLLDQAEKHKQAFGDSFISIEHLLLALAGDNRCGRKLLNQAGVDAGKLKVAIDAVRGNQKVTDQNPEGTYE SLEKYGRDLSAAAREGKLDPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGDVPAALQNRQLIT LDMGALIAGAKYRGEFEERLKAVLKEVTASEGQIVLFIDEIHTVVGAGATGGAMDASNLLKPMLARGELRCIGATTLDEH RQHIEKDPALERRFQQVLVDQPTVQDTISILRGLKERYEVHHGVRIADNALVAAAVLSSRYIADRFLPDKAIDLMDESAA RLKMEITSKPEEIDEIDRKIVQLEMEKLSLGRESDSVSKERLEKLERELAELAEQQSALNAQWQQEKGAIDDLSSLKEEI ERVQLQVEQAKRSYDLNKAAELEYGTLAGLQKQLSEKETALAQDGEAGDKSLLREEVTEDDIADVIAKWTGIPVAKLVQS EMEKLLGLEAELHQRVIGQEQAVQAVADAIQRSRAGLSDPNRPIASFLFLGPTGVGKTELSKALASQLFDSEAALVRIDM SEYMEKHSVSRLIGAPPGYVGYEAGGQLTEAVRRRPYAVILFDEVEKAHQDVFNVMLQILDDGRVTDGQGRTVDFTNTVL ILTSNIGSQSILDLGGDDSQYREMERRVHDALHAHFRPEFLNRLDETIIFHSLRREELRQIVALQVNRLRERLCDRKLGL EISDTAADWLANAGYDPVYGARPLKRAIQRELETPIAKSILAGLYGDSQIVHVDVDVDQERLSFR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 1e-98 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB1 | NP_894282.1 | ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB | VFG2084 | Protein | 2e-107 | 42 |
| clpB1 | NP_894282.1 | ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB | VFG2076 | Protein | 1e-120 | 41 |
