Gene Information

Name : PMT0418 (PMT0418)
Accession : NP_894251.1
Strain : Prochlorococcus marinus MIT 9313
Genome accession: NC_005071
Putative virulence/resistance : Virulence
Product : ABC transporter substrate-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 467054 - 468055 bp
Length : 1002 bp
Strand : -
Note : -

DNA sequence : 
ATGAAATACCCCCTGAGAGTCCTTTGGTGCGAACGGACCTATCACGTGTCTCAATTGATCTCTGGGCGTCAAGCCGTCCG
TTTTGTACTTTCCTTCTGCTGCCTTGCACTTCTAGGTGCCTGCACACCACCAACCAGGATGGCGAGCCAGTCCCAGGCCC
AAGACTCAGGCAAACCTCTTGTGCTCACCACCTTCACGGTGCTGGCAGACATGGCACGCAATGTTGCCGGCGACCGTTTA
CAGGTGCGCTCCATCGTCAAGCAGGGCGCTGAAATTCATGGTTATCAGCCCACGCCAAGTGACCTGGCCCAAGCTGTTGG
TGCAGATTTGATTGTCGAAAATGGCTTTGGGCTGGAACTCTGGGCGCGCAAGTTCACTGCCGCTGCTGGCAAGGTCTCAA
CGCTGACTCTTAGTGAGGGGATGGAGCCACTGTTAATTGAGGGGGATGCCTACGCAGGCAAGCCCAATCCTCATGCCTGG
ATGTCTCCGCAACGGGCGATGCAATACGTCGATCAACTGGTGAAAGCCTTTAGCAGGATTGATCCAGAAGGTGCCAAGAC
CTTTGCCATTAATGGTCGTCGCTACAAAGACCAGCTCCAAAAACTTGATGATGAACTAAGGACATCTCTGGCAACGATTC
CAGCCAAACGTCGTTTACTGGTCACCTGTGAGGGAGCCTTCACCTACTTGGCAAAGGATTACGGCATGGAGGAGGCTTAC
CTTTGGCCTGTCAATGCAGAGAGTGAGGTCACACCTCAACGTATGGCCAAACTCATCGAGACCGTCAAGCTGCGTGAAGT
GCCAGCGATCTTCTGCGAAAGCACTGTCAGCGACAAGGCTCAGCGTGAGGTCGCACGGGCTAGCGGCGCTCGCTTTGGCG
GTACATTCTTTGTTGATTCTCTTTCGCAAGCCGATGGGCCGGCCTCGACCTTGCTCGATCTTCAACGACATAACGTCGAT
CTGATTCTGGATGAATTGGTACCAGTCAATCGCGAAAAATAA

Protein sequence : 
MKYPLRVLWCERTYHVSQLISGRQAVRFVLSFCCLALLGACTPPTRMASQSQAQDSGKPLVLTTFTVLADMARNVAGDRL
QVRSIVKQGAEIHGYQPTPSDLAQAVGADLIVENGFGLELWARKFTAAAGKVSTLTLSEGMEPLLIEGDAYAGKPNPHAW
MSPQRAMQYVDQLVKAFSRIDPEGAKTFAINGRRYKDQLQKLDDELRTSLATIPAKRRLLVTCEGAFTYLAKDYGMEEAY
LWPVNAESEVTPQRMAKLIETVKLREVPAIFCESTVSDKAQREVARASGARFGGTFFVDSLSQADGPASTLLDLQRHNVD
LILDELVPVNREK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 6e-66 52
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 6e-66 52
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 6e-66 52
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 6e-66 52
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 4e-66 52

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PMT0418 NP_894251.1 ABC transporter substrate-binding protein BAC0349 Protein 3e-66 52
PMT0418 NP_894251.1 ABC transporter substrate-binding protein BAC0439 Protein 3e-59 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PMT0418 NP_894251.1 ABC transporter substrate-binding protein VFG0525 Protein 2e-66 52