Gene Information

Name : PMT0417 (PMT0417)
Accession : NP_894250.1
Strain : Prochlorococcus marinus MIT 9313
Genome accession: NC_005071
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 466257 - 467054 bp
Length : 798 bp
Strand : -
Note : -

DNA sequence : 
ATGGATCAGTGTCGTTCAATTCCTTTCGGCGATCGCCTGCGCATTGAGGCCGATCAAATTTGCGTGGATTACAACGGCGT
CGTGGCGCTTTATGACGCCAGCCTGCATTTGCGGGCTGGCTGCATCTGCGGGCTAGTTGGAATGAATGGTTCTGGCAAGT
CAACCCTTTTCAAGGCCCTGATGGGTTTTGTAAGACCATCAAGAGGAACGATCCAAATCAATGGGCTATCAGTTCCCCGT
GCCCAGCGCGATCAGGCTGTTGCCTACGTCCCTCAGAGCGAGGAAATCGATTGCTCGTTCCCAATAAGCGTCTGGGAAGT
GGTGATGATGGGTCGCTATGGCTCGATGAATCTCTTACGCATCCCTAGGGAATCAGATCGATTGGCGGTTTGGCATGCCC
TCGAACGGGTGGAGCTCCTCGACTTGAGACATCGCCCCATTGGGGCCCTCTCCGGCGGCCAGCGCAAGCGGGCATTCCTG
GCCCGCGCAATTGCCCAGCGCGCCTCTGTACTCCTACTCGATGAGCCATTTAACGGTGTTGATGTACGAACCGAAAAGCT
CATGGCGGAGCTGTTCCTTCAGTTTCGTCATGAGGGTCACACCATCTTGATCTCCACCCATGACCTCAGTCATGTGCGCG
AGTTCTGCGATCTGGTGGTACTCATCAACAAGACGGTGCTTGCCTATGGCGAAACGGCAGAGGTCTTTACTCCAGAGAAC
CTCGCCATGACATTCGGCGGCATGGTTCCGAACGTCCTGAGCGGTGGTCCGACCTCCACGGAGGACTTCAAGCAATGA

Protein sequence : 
MDQCRSIPFGDRLRIEADQICVDYNGVVALYDASLHLRAGCICGLVGMNGSGKSTLFKALMGFVRPSRGTIQINGLSVPR
AQRDQAVAYVPQSEEIDCSFPISVWEVVMMGRYGSMNLLRIPRESDRLAVWHALERVELLDLRHRPIGALSGGQRKRAFL
ARAIAQRASVLLLDEPFNGVDVRTEKLMAELFLQFRHEGHTILISTHDLSHVREFCDLVVLINKTVLAYGETAEVFTPEN
LAMTFGGMVPNVLSGGPTSTEDFKQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 1e-56 56
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 1e-56 56
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 3e-56 56
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 9e-56 56
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 4e-56 56

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PMT0417 NP_894250.1 ABC transporter ATP-binding protein BAC0350 Protein 2e-56 56
PMT0417 NP_894250.1 ABC transporter ATP-binding protein BAC0440 Protein 7e-64 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PMT0417 NP_894250.1 ABC transporter ATP-binding protein VFG0526 Protein 2e-56 56