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Name : rpaB (PMT1994) Accession : NP_895819.1 Strain : Prochlorococcus marinus MIT 9313 Genome accession: NC_005071 Putative virulence/resistance : Virulence Product : two-component response regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 2108447 - 2109193 bp Length : 747 bp Strand : + Note : - DNA sequence : ATGACGGCCACCAGCCCATCTAAAGAGACGATCCTCGTGGTCGACGATGAGGCCAGCATTCGTCGGATCCTCGAAACCCG TCTCTCGATGATCGGCTATCAAGTGTTCACGGCATGTGACGGCAACGAAGCTCTCGATATCTTCCACAACTGTGAGCCTG ATCTTGTTGTGCTCGACGTGATGATGCCAAAGCTTGATGGCTATGGCGTTTGTCAAGAGCTTCGCAAAGAATCGGATGTG CCGATCGTGATGCTCACGGCCCTTGGAGATGTCGCTGACAGAATCACGGGGCTTGAGCTGGGTGCAGACGACTACGTCGT CAAACCCTTCAGCCCTAAGGAACTTGAAGCGCGCATACGCTGCGTGCTTCGACGAGTCGAGAAAGAGCACGTTGCCGGCA TCCCTAACTCAGGGGTGATTCAAGTGGCTGAACTAAGAGTCGACACCAACAAGCGACAGGTTTTCCGAGGAGATGAGCGG ATTCGCCTTACCGGTATGGAATTCAGCCTGCTTGAGCTACTGGTCAGCCGCTCAGGGGAGCCTTTCAGTCGCGGCGAAAT CCTCAAGGAGGTATGGGGTTATACACCTGAACGACATGTAGACACCAGAGTCGTGGATGTTCATATTTCACGTCTTCGCT CCAAACTCGAAGACGATCCCGCCAATCCCGAGCTGATCCTCACCGCTCGAGGTACCGGCTACCTGTTCCAGCGCATCATC GACTCCCTTGCCCCCGAAGGACTCTGA Protein sequence : MTATSPSKETILVVDDEASIRRILETRLSMIGYQVFTACDGNEALDIFHNCEPDLVVLDVMMPKLDGYGVCQELRKESDV PIVMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRCVLRRVEKEHVAGIPNSGVIQVAELRVDTNKRQVFRGDER IRLTGMEFSLLELLVSRSGEPFSRGEILKEVWGYTPERHVDTRVVDVHISRLRSKLEDDPANPELILTARGTGYLFQRII DSLAPEGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| copR | NP_460069.2 | transcriptional regulatory protein YedW | Not tested | SPI-5 | Protein | 1e-31 | 42 |
| copR | AAC33719.1 | regulatory protein CopR | Not tested | SPI-5 | Protein | 9e-31 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| rpaB | NP_895819.1 | two-component response regulator | BAC0125 | Protein | 8e-39 | 47 |
| rpaB | NP_895819.1 | two-component response regulator | NC_002952.2859905.p0 | Protein | 1e-44 | 47 |
| rpaB | NP_895819.1 | two-component response regulator | NC_002745.1124361.p0 | Protein | 2e-44 | 47 |
| rpaB | NP_895819.1 | two-component response regulator | NC_009782.5559369.p0 | Protein | 2e-44 | 47 |
| rpaB | NP_895819.1 | two-component response regulator | NC_002951.3237708.p0 | Protein | 2e-44 | 47 |
| rpaB | NP_895819.1 | two-component response regulator | NC_002758.1121668.p0 | Protein | 2e-44 | 47 |
| rpaB | NP_895819.1 | two-component response regulator | NC_009641.5332272.p0 | Protein | 2e-44 | 47 |
| rpaB | NP_895819.1 | two-component response regulator | NC_013450.8614421.p0 | Protein | 2e-44 | 47 |
| rpaB | NP_895819.1 | two-component response regulator | NC_007793.3914279.p0 | Protein | 2e-44 | 47 |
| rpaB | NP_895819.1 | two-component response regulator | NC_003923.1003749.p0 | Protein | 3e-44 | 47 |
| rpaB | NP_895819.1 | two-component response regulator | NC_007622.3794472.p0 | Protein | 1e-44 | 47 |
| rpaB | NP_895819.1 | two-component response regulator | AE000516.2.gene3505. | Protein | 6e-40 | 46 |
| rpaB | NP_895819.1 | two-component response regulator | NC_012469.1.7685629. | Protein | 1e-41 | 44 |
| rpaB | NP_895819.1 | two-component response regulator | HE999704.1.gene2815. | Protein | 5e-40 | 44 |
| rpaB | NP_895819.1 | two-component response regulator | BAC0083 | Protein | 7e-35 | 43 |
| rpaB | NP_895819.1 | two-component response regulator | BAC0197 | Protein | 1e-33 | 43 |
| rpaB | NP_895819.1 | two-component response regulator | BAC0638 | Protein | 2e-27 | 43 |
| rpaB | NP_895819.1 | two-component response regulator | CP000034.1.gene3671. | Protein | 5e-38 | 43 |
| rpaB | NP_895819.1 | two-component response regulator | BAC0308 | Protein | 3e-35 | 42 |
| rpaB | NP_895819.1 | two-component response regulator | HE999704.1.gene1528. | Protein | 3e-30 | 42 |
| rpaB | NP_895819.1 | two-component response regulator | NC_003923.1003417.p0 | Protein | 4e-35 | 41 |
| rpaB | NP_895819.1 | two-component response regulator | NC_013450.8614146.p0 | Protein | 4e-35 | 41 |
| rpaB | NP_895819.1 | two-component response regulator | NC_002951.3238224.p0 | Protein | 4e-35 | 41 |
| rpaB | NP_895819.1 | two-component response regulator | NC_007793.3914065.p0 | Protein | 4e-35 | 41 |
| rpaB | NP_895819.1 | two-component response regulator | NC_002758.1121390.p0 | Protein | 4e-35 | 41 |
| rpaB | NP_895819.1 | two-component response regulator | NC_010079.5776364.p0 | Protein | 4e-35 | 41 |
| rpaB | NP_895819.1 | two-component response regulator | NC_002952.2859858.p0 | Protein | 4e-35 | 41 |
| rpaB | NP_895819.1 | two-component response regulator | NC_007622.3794948.p0 | Protein | 4e-35 | 41 |
| rpaB | NP_895819.1 | two-component response regulator | CP000675.2.gene1535. | Protein | 2e-34 | 41 |
| rpaB | NP_895819.1 | two-component response regulator | AE016830.1.gene1681. | Protein | 3e-38 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| rpaB | NP_895819.1 | two-component response regulator | VFG1390 | Protein | 6e-39 | 45 |
| rpaB | NP_895819.1 | two-component response regulator | VFG1389 | Protein | 1e-30 | 43 |
| rpaB | NP_895819.1 | two-component response regulator | VFG0596 | Protein | 5e-32 | 42 |
