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Name : clpC (PMT1061) Accession : NP_894892.1 Strain : Prochlorococcus marinus MIT 9313 Genome accession: NC_005071 Putative virulence/resistance : Virulence Product : protein ClpC Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1143769 - 1146348 bp Length : 2580 bp Strand : + Note : regulatory subunit of ATP-dependent Clp protease DNA sequence : ATGTTCGAGCGGTTTACCGAGAAGGCCATCAAGGTGATCATGCTGGCCCAGGAAGAGGCCCGGCGTCTTGGTCATAATTT CGTGGGCACCGAGCAGATTCTTTTGGGATTGATCGGTGAGGGCACAGGTGTGGCAGCGAAGGTTCTCAAGTCAATGAGCG TGAACCTTAAAGACGCCCGCGTTGAAGTTGAAAAGATCATTGGCCGTGGTTCAGGCTTCGTCGCCGTAGAAATCCCCTTT ACTCCCAGAGCAAAGCGCGTACTAGAACTCTCTCTAGAAGAAGCCCGACAACTTGGCCACAATTACATCGGTACAGAACA TTTACTGCTTGGTCTCATCCGAGAAGGAGAGGGTGTAGCAGCCCGAGTCCTCGAAAACCTTGGTGTAGACCTAGCAAAGG TGCGCACCCAAGTAATCCGCATGCTCGGAGAAACCGCCGAGGTCACTGCAGGCGGAGGTGGAGGCAAAGGCTCAACGAAA ACAGCCACACTTGATGAATTCGGCAGCAACCTGACCCAGCTAGCCAATGAATCCAAGCTTGATCCTGTTGTCGGGCGACA AAATGAAATCGATCGTGTTATTCAGATCCTCGGAAGACGCACAAAGAACAACCCTGTACTGATTGGAGAGCCTGGAGTTG GGAAAACAGCAATTGCTGAAGGCCTAGCTCAACGCATCCAACAGGGAGATATTCCCGACATCCTTGAAGAAAAGAGAGTT CTAACCCTCGACATCGGCCTGCTAGTTGCTGGAACCAAATACCGGGGAGAGTTCGAAGAACGGCTCAAAAAGATCATGGA AGAGATCAAAGCCGCAGGCAACGTGATCCTTGTCATCGATGAAGTGCACACACTCATTGGGGCAGGCGCTGCAGAAGGTG CCATCGATGCCGCCAACATTCTCAAACCAGCACTAGCTAGAGGAGAACTGCAGTGCATAGGTGCCACCACTCTTGACGAA TATCGAAAACACATCGAACGTGATGCTGCCCTAGAACGCCGATTTCAGCCAGTCATGGTTGGCGAACCATCGATCGCTGA AACCATTGAGATCCTGCAAGGATTGAGGGAGCGCTACGAACAGCATCACCGCCTAAAAATCACAGACGAAGCCCTAGATG CCGCAGCAAACCTAGGCGATCGCTATATCTCTGATCGCTTCCTGCCGGATAAGGCCATCGACTTAATCGATGAAGCTGGC AGCCGCGTGCGTTTGCTTAACTCCAAACTTCCCCCTGCGGCAAAAGAGGTTGACAAAGAATTACGCAAGGTTCAAAAGGA AAAAGAAGATGCCGTTCGTGATCAGGACTTCGCCAAAGCCGGGGAATTACGTGAAAAAGAAGTTGAGCTAAGAGAAAAGA TCCGCACTCTGCTTCAAAGCAGTCGCCAAGGCAGTGAGGAATCGCCCCCCGCTGAGGCGGAAAATGCTGTTCGTTCCAGC GATGAGACTCCAACACCTCAACCTGAAAAAAACACAACAGCTGCATTAATTCCTCATCTCACCACACCACTGGTGACAGA AGAAGATATTGCCAACATCGTGGCAGCTTGGACCGGAGTACCTGTACAAAAGCTCACCGAAAGCGAATCAGTGAAGCTCC TAAACATGGAGGAAACCCTCCACCAGAGGCTGATTGGCCAAGATGAAGCCGTCAAAGCAGTCTCGAAAGCCATCCGTCGA GCCAGGGTAGGCCTCAAAAACCCCAATCGCCCCATTGCCAGTTTCATCTTTTCAGGCCCTACTGGCGTCGGCAAAACCGA ACTAACCAAAGCTCTAGCCACCTACTTCTTTGGTAGCGAAGAAGCCATGATCCGACTAGACATGTCGGAATTCATGGAGC GACATACGGTCAGCAAGCTGATCGGATCACCTCCTGGCTATGTGGGGTTCAACGAAGGGGGACAACTCACCGAAGCTGTT CGTCGCAGACCTTATACCGTTGTGCTCTTCGACGAAATCGAAAAGGCACACCCAGATGTTTTTAACCTGCTGCTTCAATT ATTGGAAGATGGTCGACTAACTGACTCCAAAGGAAGAACAGTGGACTTCAAGAATACATTGATCATTATGACTTCGAATA TCGGTTCAAAAGTGATTGAGAAAGGAGGCGGAGGACTTGGCTTCGAATTCTCAGGTGAAAACGCAGAAGACAGTCAATAC AACCGAATCAAATCCCTTGTCAACGAAGAACTAAAACAATACTTCCGTCCTGAATTTCTGAACCGTCTCGATGAAATTAT CGTCTTCCGCCAACTCAGTAGAAATGAGGTGAAAGAAATCGCTGAGATCATGCTTCAAGAAGTGTTCTCTCGCATGCAAG ACAAAGGGATCACTCTCACTGTTTCAGATGCATTCAAAGAACGACTAGTGGAAGAGGGATACAACCCCTCTTATGGAGCG AGGCCGCTACGAAGGGCCGTCATGCGACTCATGGAAGACAGTCTTGCTGAGGAAGTGCTTACTGGCCGCATCAAGGACGG TGATGCTGCGGAGATGGATGTGGATGACAACAAGCAAATCGTTGTACGCCATGTCAGCAAAACTACTGCCACACCGGAAC TCGCTGGAGCAGGAGTCTGA Protein sequence : MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMSVNLKDARVEVEKIIGRGSGFVAVEIPF TPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLAKVRTQVIRMLGETAEVTAGGGGGKGSTK TATLDEFGSNLTQLANESKLDPVVGRQNEIDRVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIQQGDIPDILEEKRV LTLDIGLLVAGTKYRGEFEERLKKIMEEIKAAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDE YRKHIERDAALERRFQPVMVGEPSIAETIEILQGLRERYEQHHRLKITDEALDAAANLGDRYISDRFLPDKAIDLIDEAG SRVRLLNSKLPPAAKEVDKELRKVQKEKEDAVRDQDFAKAGELREKEVELREKIRTLLQSSRQGSEESPPAEAENAVRSS DETPTPQPEKNTTAALIPHLTTPLVTEEDIANIVAAWTGVPVQKLTESESVKLLNMEETLHQRLIGQDEAVKAVSKAIRR ARVGLKNPNRPIASFIFSGPTGVGKTELTKALATYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGFNEGGQLTEAV RRRPYTVVLFDEIEKAHPDVFNLLLQLLEDGRLTDSKGRTVDFKNTLIIMTSNIGSKVIEKGGGGLGFEFSGENAEDSQY NRIKSLVNEELKQYFRPEFLNRLDEIIVFRQLSRNEVKEIAEIMLQEVFSRMQDKGITLTVSDAFKERLVEEGYNPSYGA RPLRRAVMRLMEDSLAEEVLTGRIKDGDAAEMDVDDNKQIVVRHVSKTTATPELAGAGV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 55 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | NP_894892.1 | protein ClpC | VFG0079 | Protein | 0.0 | 57 |
