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Name : kdsB1 (SYNW0425) Accession : NP_896520.1 Strain : Synechococcus sp. WH 8102 Genome accession: NC_005070 Putative virulence/resistance : Unknown Product : 3-deoxy-manno-octulosonate cytidylyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : 2.7.7.38 Position : 428869 - 429603 bp Length : 735 bp Strand : + Note : CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS DNA sequence : ATGAAAGTCTGCGTTGTAATTCCTGCACGATATTCATCATCTCGTTTTCCCGGGAAGCCCTTAGTCAACTTATTATATAA ACCGATGATTATATGGGTTGCGGACATAGCAGCCCGTGCGGTTGGTATTGAGCATGTTTATGTTGCTACTGATGATACTC GCATAGCAGATGCCGTTACTTCATATGGATATAAATTCATAGAAACAAGTCCTCATGCTCTTACAGGTACAGATCGTGTT GCTGAAGCCTCTAAACAAATAGATTATGATATTTACATTAATGTGCAGGGAGATGAACCAACGATTGACCACTTGGAAAT TTTAAAATGTATTCAACTGAAGAAAGAAAACTTTGATTGCGTTGTTAATGGATATTGCACCATCAGCACTAACTCAAACC CTTCCTCCAAAAACATCCCTAAGGTTGTCAAGACAGAGAAAAACAGATTAGTTTATATGTCGCGCTCATTAGTTCCAGGC TTTAAAGACCTCAACATTATGCCTAAAGAATACTTAAAACAAGTGTGTATTTATGGGTTTAGTTTTGAAGAGCTTCAGTT ATTTAGTAATTATGGCCGTAAAAGCTTGTTAGAGCAGTCTGAAGATATCGAAATACTACGCTTCTTGGACCTGGGAAAAC AAGTGTTAATGTATCAGTGTGCAAAAGAAAGCCTGGCTGTTGATGTTCCAAGTGACATCCAAATTGTTGAGGATTACCTT CAGCCCAATAAATGA Protein sequence : MKVCVVIPARYSSSRFPGKPLVNLLYKPMIIWVADIAARAVGIEHVYVATDDTRIADAVTSYGYKFIETSPHALTGTDRV AEASKQIDYDIYINVQGDEPTIDHLEILKCIQLKKENFDCVVNGYCTISTNSNPSSKNIPKVVKTEKNRLVYMSRSLVPG FKDLNIMPKEYLKQVCIYGFSFEELQLFSNYGRKSLLEQSEDIEILRFLDLGKQVLMYQCAKESLAVDVPSDIQIVEDYL QPNK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAK15335.1 | unknown | Not tested | Not named | Protein | 5e-37 | 42 |
