Gene Information

Name : SYNW1874 (SYNW1874)
Accession : NP_897965.1
Strain : Synechococcus sp. WH 8102
Genome accession: NC_005070
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1789537 - 1790235 bp
Length : 699 bp
Strand : +
Note : -

DNA sequence : 
TTGGCTGATTCAACCTCCCAAGCTGTTGCTGAACTGAGTGGCGTCAGCAAGGTCTACGGCCAGGGTGATCTTGAAGTGAG
GGCGCTGGATCAACTAGATCTCACCGTTCGCAGCGGCGATTATCTGGCGGTGATGGGGGCGAGCGGTTCCGGCAAGAGCA
CGGCAATGAACATTCTTGGCTGCCTGGATCGTCCGAGCGATGGCCGATACCGGCTCAATGGAATTGCCGTTGAACAGCTC
GATGATGATGAGCTTGCGGACCTGCGCAACCAGTCCCTGGGATTCGTGTTCCAACAGTTCCATCTCCTTCCCCATGCCTC
GGCCATGGAGAACGTGATGCTGCCGATGGTCTACGCCGGAATCCCACTGGACGAACGCAAGGAACGAGCGGCTTCAGCCC
TGGATCGCGTCGGCCTGAGTCAACGACTGGACAATCGTCCCAACCAGCTCTCCGGCGGCCAGCAGCAGCGGGTCGCCATC
GCGAGAGCCATCATCAATCGCCCGAGCCTTCTTCTGGCGGACGAGCCCACCGGCGCCCTCGACTCGAACACCACGGCTGA
AGTGCTGGAACTGTTTGATGAATTGCACCAGCAGGGAATCACCCTGGTGATGGTGACCCATGAAGACGATGTAGCAGCCC
GAGCCCATCGAATTGCCCGTTTTCAGGATGGCCGCATCGTGAATGAAGCATCACAATGA

Protein sequence : 
MADSTSQAVAELSGVSKVYGQGDLEVRALDQLDLTVRSGDYLAVMGASGSGKSTAMNILGCLDRPSDGRYRLNGIAVEQL
DDDELADLRNQSLGFVFQQFHLLPHASAMENVMLPMVYAGIPLDERKERAASALDRVGLSQRLDNRPNQLSGGQQQRVAI
ARAIINRPSLLLADEPTGALDSNTTAEVLELFDELHQQGITLVMVTHEDDVAARAHRIARFQDGRIVNEASQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-32 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-33 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-33 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-33 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SYNW1874 NP_897965.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 6e-49 52
SYNW1874 NP_897965.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-49 48
SYNW1874 NP_897965.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 5e-36 41