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Name : thiC (SYNW0140) Accession : NP_896235.1 Strain : Synechococcus sp. WH 8102 Genome accession: NC_005070 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 135007 - 136458 bp Length : 1452 bp Strand : + Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : GTGATCGAACAGGCCGTTGCCGACCTCTGGCTTCCCATTGCAGTTCTGATCATGCGCGCTTCCTGGGTGTCTCCCCGTAA GGGCCAGGCCAATGTGTCTCAGATGCATTACGCCCGTCAGGGGGTGGTGACTGAAGAAATGGCCTACGTGGCGAAACGGG AAAATCTGCCCGAATCGTTGGTCATGGAGGAGGTGGCCCGGGGCCGCATGATCATCCCCGCCAACATCAATCACACCGGC CTTGAGCCCATGGCGATCGGCATCGCCAGCAAGTGCAAGGTGAATGCCAACATCGGCGCCTCTCCCAATGCCTCCGATGC TGCCGAGGAGGTGAACAAGCTGAAGCTGGCGGTGAAGTACGGCGCCGACACGGTAATGGACCTCTCCACCGGTGGCGTGA ACCTGGATGAGGTGCGCACGGCGATCATCGATGCATCTCCTGTGCCGATTGGCACTGTGCCGGTGTATCAGGCCCTGGAG AGCGTGCACGGCTCGATCGAGAAGCTCGATGAGGATGATTTCCTTCACATCATCGAGAAGCACTGTCAGCAGGGTGTGGA CTACCAGACCATCCACGCGGGTTTGCTGATCGAGCACCTGCCCAAGGTGAAGGGGCGTCTCACCGGCATCGTGAGCCGCG GCGGCGGAATCCTGGCCCAGTGGATGCTTTATCACCATCGCCAGAACCCGCTGTACACGCGGTTTGATGACATCTGCGAG ATCTTCAAGCGCTACGACTGCACCTTCTCGTTGGGAGATTCCCTGCGTCCCGGTTGCCAGCACGATGCCTCCGATGCTGC TCAGCTGGCTGAACTGAAGACCCTCGGAGAACTCACTCGTCGTGCCTGGAAGCACGACGTGCAGGTGATGGTGGAAGGTC CTGGCCATGTGCCCCTGGACCAGATCGAGTTCAACGTGAAGAAGCAGATGGAGGAGTGCAACGAGGCTCCCTTCTACGTG CTGGGTCCACTGGTCACCGATATCGCTCCCGGTTACGACCACATCACCTCAGCGATCGGTGCGGCCATGGCTGGCTGGCA TGGCACGGCGATGCTCTGCTACGTCACCCCCAAGGAGCACCTCGGTCTGCCCAACGCGGAAGACGTGCGTGAAGGCCTGA TCGCGTACAAGATTGCAGCTCATGCGGCTGATATCGCACGCCATCGCCCCGGTGCCCGTGATCGTGACGATGAGCTCAGC CGCGCCCGTTACAACTTCGACTGGAACAAGCAGTTTGAGTTGTCGCTGGATCCCGAGCGCGCCAAGGAGTACCACGACGA AACGCTGCCGGCGGACATCTACAAGCAGGCCGAGTTCTGCTCCATGTGTGGACCCAAGCACTGCCCGATGCAGACCAAGA TCACCGAAGAGGACATCGAAGGTCTGGAGAAGGTGTTGGAAGCTCGTGGAGCAGCAGAGCTCACCCCTGTGAAGCTCGAT AAGGCTGACTGA Protein sequence : MIEQAVADLWLPIAVLIMRASWVSPRKGQANVSQMHYARQGVVTEEMAYVAKRENLPESLVMEEVARGRMIIPANINHTG LEPMAIGIASKCKVNANIGASPNASDAAEEVNKLKLAVKYGADTVMDLSTGGVNLDEVRTAIIDASPVPIGTVPVYQALE SVHGSIEKLDEDDFLHIIEKHCQQGVDYQTIHAGLLIEHLPKVKGRLTGIVSRGGGILAQWMLYHHRQNPLYTRFDDICE IFKRYDCTFSLGDSLRPGCQHDASDAAQLAELKTLGELTRRAWKHDVQVMVEGPGHVPLDQIEFNVKKQMEECNEAPFYV LGPLVTDIAPGYDHITSAIGAAMAGWHGTAMLCYVTPKEHLGLPNAEDVREGLIAYKIAAHAADIARHRPGARDRDDELS RARYNFDWNKQFELSLDPERAKEYHDETLPADIYKQAEFCSMCGPKHCPMQTKITEEDIEGLEKVLEARGAAELTPVKLD KAD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 3e-119 | 60 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 3e-119 | 60 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 1e-116 | 56 |
