Gene Information

Name : dnaB (Bfl027)
Accession : NP_878342.1
Strain : Candidatus Blochmannia floridanus
Genome accession: NC_005061
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0305
EC number : 3.6.1.-
Position : 30665 - 32065 bp
Length : 1401 bp
Strand : +
Note : COG caterory=L

DNA sequence :
ATGTTGAAAAAAAAATATATTAAAAATTCGAATATCGTTCGAGATGATCAAATAAACAATATAAAGATATTACCGTATTC
ATTAGAAGCAGAACAATCGGTATTAGGAAGTTTAATGTTAGATAATGAAAAATGGGATGAGGTATTTACTCAAATAGTTT
CGGATGATTTTTTTAATTATGCGCATCGAATTATTTTTTTAGAAATGCAACGTTTATTAGAATCAAATAGTCCTATTGAT
TTGATAACATTATCAGAATCTTTAGAGATTCAAGGAAAATTGGAATCGGTAGGAGGTTTTGGTTATTTAGCAGAGTTATC
TAAGAATGTTCCGAGTGTTTCTAATATCAATGCATATACTAATATTGTGAAGGAACGATCAACAATACGGTCTATTATTA
CTACAGCTAACGAAATTGCTAATGCTGGTTACAATACTCAAGGTAGAAGTAGTGAGGAATTATTGGATTTTGCTGAATCT
CTGATTTTTAGTATTTCACGTAGTAGGAATGATAAATTTTTTACTCCTAAATCCATAGATCATATTTTATATGATACTAT
TTCGCATCTTGATCAGGCTCATGGAAATATAAGAGATGGTATTACTGGTATTTCTAGTGGATATATAGATTTAGATAAAA
AAACACATGGATTACATAAATCTGATTTAATTATTATAGCAGCACGGCCTGCGATGGGGAAAACCGCATTTGCTATGAAT
TTATGCGAACATGTAGCAATGACTGAATTAAAACCAGTGTTGATATTTAGTTTAGAAATGACTGGAGAGCAAATAGTAAT
GAGGATGTTATCCTCTTTATCTCGTGTAGATTATATACGTATCCGAACGGGTCAATTGAATAGCGAAGATCGATCGAGAA
TTTCGAGTACTATTGAATTATTGTTAGAGAAACGTAATTTATATATAGATGATTCTTCATATCTTACTCCTACTGATGTG
AGAGGTAGATCGCGTAGATTATTTCGAGAACATGATGGACTAAGTTTAATTATGATTGATTATTTGCAATTGATGAGAGT
GCCAACTCTTGCTAATAATCGTACATTGGAAATTTCAGAGATTTCTAGATCTTTAAAAGCTTTAGCCAAAGAATTGAAAG
TTCCAGTAATTGCTATTTCTCAGTTGAATAGGAGTTTAGAACAAAGAGTAGATAAACATCCTATTAATTCAGATTTACGC
GAATCTGGTTCGATTGAACAAGATGCGGATTTAATTTTATTTATTTATAGAGATGAATTATATAATGAGAATAGTGATAT
GAAAGGTATTGCTGAAATCATTTTGGGTAAGCAACGAAATGGGCCTGTTGGTACTGTGCGATTAATTTTTAATGGAAAAT
GGACTAGGTTTGATAATTATGTGGATCTAAATCAATATTAG

Protein sequence :
MLKKKYIKNSNIVRDDQINNIKILPYSLEAEQSVLGSLMLDNEKWDEVFTQIVSDDFFNYAHRIIFLEMQRLLESNSPID
LITLSESLEIQGKLESVGGFGYLAELSKNVPSVSNINAYTNIVKERSTIRSIITTANEIANAGYNTQGRSSEELLDFAES
LIFSISRSRNDKFFTPKSIDHILYDTISHLDQAHGNIRDGITGISSGYIDLDKKTHGLHKSDLIIIAARPAMGKTAFAMN
LCEHVAMTELKPVLIFSLEMTGEQIVMRMLSSLSRVDYIRIRTGQLNSEDRSRISSTIELLLEKRNLYIDDSSYLTPTDV
RGRSRRLFREHDGLSLIMIDYLQLMRVPTLANNRTLEISEISRSLKALAKELKVPVIAISQLNRSLEQRVDKHPINSDLR
ESGSIEQDADLILFIYRDELYNENSDMKGIAEIILGKQRNGPVGTVRLIFNGKWTRFDNYVDLNQY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 3e-89 51
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 2e-92 49
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 7e-93 49
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 4e-93 48
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 5e-85 47
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 5e-85 47
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 1e-75 45
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 4e-87 45
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 6e-66 43