Gene Information

Name : ribD (Bfl234)
Accession : NP_878531.1
Strain : Candidatus Blochmannia floridanus
Genome accession: NC_005061
Putative virulence/resistance : Unknown
Product : bifunctional pyrimidine deaminase/reductase in pathway of riboflavin synthesis
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : 1.1.1.193
Position : 248862 - 249998 bp
Length : 1137 bp
Strand : +
Note : COG caterory=H

DNA sequence :
ATGATAAAAGATAAGCTTTGTGATAATGATTTGATATATTTATCTAGAGCATTTCGATTAGCTCGTAAGGGTCGTTTTAC
GACCATGCCTAATCCTAATGTAGGGTGTGTTATTGTAAAAGAAAATAAAGTGATAGGAGAAGGTTATCATATACGGGCTG
GGGAGGATCATGCTGAAATACATGCATTACGTATTGCTGGAGATTCTGCACGGGGAGCTACTGTTTACGTCACATTGGAA
CCATGTAGTCATTATGGTCGTACTCCACCTTGTACTACTGCTTTGATAAATTCAGGAATTAAATGCGTTGTGATTTCTAT
GCTAGATCCTGACCCTGAAATAAAGGGTCGTGGGGTACGGTTATTACAAGAATCAGGAATTTTAGTAAGGCATAGCCTGA
TGTTATCTGAAGCTGAACATATAAATAAGGGATTTATTAAACGTATACGTACTGGTATGCCATGGATTAAAGTAAAATTA
GCTGCGTCTTTGGATGGACGAACCGCTATGAAAACCGGTGAGAGTAAATGGATTACTTCTGTGCAATCACGTCAAGATGT
ACAATGTTTTAGAGCAGAAAGTGATGTAATTTTGTCTACTGCTACAACTATATTGATAGATAACCCTCATTTAAATGTTC
GATGGTCATTTTTTCCAAAAAATATACAATTAAAGTATTGTAGAGAACATATTAGACAACCGTTGAGAGTAATTATAGAT
AGTGCTAATCGTGTTTTACCTACTCATCGTTTTATACAAAATTCAGGAAAAGTTATTTTAGTGAGATTAAAAAAAGATAA
TTTGAATTGGCCTGAATCAGTAGAACAGTTGTTAGCTCCAGAAATAAATTTAGTTGGTAGTTATCAAATTAATTTAGAAG
CGTTGATGAAATATTTGGGGTATGTTCGAAAAATTAATAATGTTTGGGTAGAGGCAGGTCCAACGCTATCAGGATCTTTA
TTAGATATTGGTTTGGTAGATGAATTGATTTTATATCAGTCCATAAAATTTTTGGGATCGAATGCTAAACCTTTATGTTT
TTTGCCTAATATTGATAATTTAAAAGATGTTAAGACTTTTAAATTACTTAATATTAAAAATATTGGGCCTGATATACGTT
TAACGTTAAAACCATAA

Protein sequence :
MIKDKLCDNDLIYLSRAFRLARKGRFTTMPNPNVGCVIVKENKVIGEGYHIRAGEDHAEIHALRIAGDSARGATVYVTLE
PCSHYGRTPPCTTALINSGIKCVVISMLDPDPEIKGRGVRLLQESGILVRHSLMLSEAEHINKGFIKRIRTGMPWIKVKL
AASLDGRTAMKTGESKWITSVQSRQDVQCFRAESDVILSTATTILIDNPHLNVRWSFFPKNIQLKYCREHIRQPLRVIID
SANRVLPTHRFIQNSGKVILVRLKKDNLNWPESVEQLLAPEINLVGSYQINLEALMKYLGYVRKINNVWVEAGPTLSGSL
LDIGLVDELILYQSIKFLGSNAKPLCFLPNIDNLKDVKTFKLLNIKNIGPDIRLTLKP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 2e-59 42
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 2e-59 42