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Name : clpC (CpB0454) Accession : NP_876727.1 Strain : Chlamydophila pneumoniae TW-183 Genome accession: NC_005043 Putative virulence/resistance : Virulence Product : class III stress response-related ATPase Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 479317 - 481854 bp Length : 2538 bp Strand : + Note : similar to class III stress response-related ATPase clpC - Bacillus subtilis DNA sequence : ATGTTTGAGAAGTTCACTAATAGAGCAAAACAAGTCATTAAACTGGCGAAAAAGGAGGCTCAGCGTTTAAATCATAACTA CCTGGGTACTGAGCACATCCTGCTTGGTCTTCTCAAACTTGGTCAAGGGGTAGCTGTTAATGTATTACGCAACCTCGGTA TAGATTTTGATACGGCACGGCAAGAGGTGGAACGCCTGATTGGTTATGGTCCAGAAATTCAAGTCTACGGAGACCCTGCC CTTACAGGAAGAGTAAAAAAATCTTTTGAATCAGCAAATGAAGAGGCCAGCCTTTTAGAGCACAATTATGTCGGGACGGA GCATTTACTCTTAGGGATCCTACATCAATCAGATAGTGTCGCTCTTCAGGTATTAGAAAACTTACATATCGATCCAAGAG AGGTTCGTAAGGAAATTCTTAAAGAATTAGAGACCTTCAATCTACAACTTCCTCCTTCGTCGTCGTCTTCTTCCTCATCC TCTCGAAGCAACCCTTCATCTTCAAAATCTCCTTTAGGTCATAGCTTAGGTTCTGACAAAAACGAAAAGCTTTCTGCTCT GAAAGCATATGGTTATGATTTAACGGAGATGGTCCGAGAGTCTAAGCTCGATCCTGTCATTGGTCGTTCTTCAGAAGTCG AACGGTTGATTTTGATTCTTTGCCGAAGAAGAAAAAACAATCCTGTACTTATTGGAGAAGCTGGAGTTGGTAAGACTGCA ATTGTTGAGGGTCTGGCTCAAAAAATCATTCTGAATGAGGTTCCTGATGCCTTACGGAAAAAGCGACTGATTACTCTAGA TCTAGCATTAATGATTGCTGGAACAAAATATCGAGGGCAATTTGAGGAACGGATCAAAGCTGTCATGGATGAAGTTCGCA AGCATGGAAACATCTTGCTCTTCATTGACGAGCTCCACACGATTGTAGGAGCAGGAGCAGCTGAAGGTGCTATCGATGCT TCAAACATTTTAAAACCTGCGTTAGCGCGAGGTGAAATTCAGTGTATTGGAGCAACTACGATAGATGAGTATCGCAAGCA CATAGAAAAAGACGCAGCTTTAGAACGTCGTTTCCAAAAAATCGTGGTTCACCCTCCTAGTGTAGATGAGACTATTGAGA TTTTACGTGGCCTCAAGAAAAAGTATGAAGAACATCACAATGTCTTCATTACTGAAGAAGCTTTAAAAGCAGCTGCGACT CTTTCTGATCAATATGTTCATGGACGTTTCCTCCCTGATAAAGCAATAGATCTTTTAGATGAAGCTGGGGCTCGTGTCCG TGTGAATACAATGGGTCAGCCTACAGATTTAATGAAGCTAGAGGCTGAAATCGAAAATACAAAATTGGCCAAAGAGCAGG CCATTGGAACTCAAGAATACGAAAAAGCTGCAGGTTTACGTGATGAAGAGAAAAAACTTCGCGAACGTCTGCAAAGTATG AAACAGGAATGGGAAAATCATAAAGAAGAGCACCAAGTTCCTGTAGATGAAGAAGCAGTCGCTCAGGTAGTTTCTCTACA AACAGGAATTCCCTCAGCAAGGCTCACAGAAGCTGAAAGTGAGAAGCTTCTGAAGTTAGAAGACACGTTAAGAAGAAAAG TCATTGGTCAAAATGATGCCGTTACCAGCATTTGCCGTGCCATCCGACGTTCTCGAACAGGGATCAAAGATCCTAACCGA CCTACGGGCTCCTTCCTATTCCTTGGGCCTACCGGTGTAGGGAAAAGCCTGCTCGCCCAACAAATTGCTATAGAGATGTT CGGTGGTGAAGACGCTCTGATTCAGGTAGACATGTCAGAGTACATGGAGAAATTTGCTGCTACCAAGATGATGGGATCAC CTCCAGGATATGTAGGTCATGAAGAAGGGGGCCACCTTACGGAACAGGTACGTCGCCGTCCTTACTGCGTTGTTCTCTTT GATGAGATAGAAAAGGCACACCCAGACATTATGGACCTGATGTTGCAAATTTTAGAGCAAGGACGTCTTACTGATTCTTT TGGTCGCAAAGTGGATTTCCGTCATGCCATTATTATCATGACCTCCAATTTGGGAGCTGATCTCATTCGTAAAAGCGGAG AAATTGGTTTTGGCTTGAAGTCCCATATGGACTATAAGGTCATCCAAGAGAAAATCGAACATGCTATGAAGAAACACTTA AAGCCTGAGTTCATTAACCGTTTGGATGAAAGTGTGATTTTCCGTCCCCTCGAGAAAGAATCTCTATCGGAGATCATCCA TTTAGAGATCAACAAACTGGACTCGAGACTGAAAAACTACCAAATGGCTTTGAACATCCCAGACTCTGTGATTTCCTTCC TAGTAACGAAGGGGCATTCTCCAGAAATGGGAGCACGTCCTCTACGCCGTGTCATTGAGCAGTACCTTGAAGATCCTCTA GCGGAGCTCTTGCTTAAAGAGTCCTGCCGTCAAGAAGCTCGCAAGCTACGAGCAACCTTGGTTGAAAATCGCGTTGCCTT TGAAAGGGAAGAAGAGGAGCAGGAAGCTGCTCTCCCTAGCCCTCACTTGGAATCATAG Protein sequence : MFEKFTNRAKQVIKLAKKEAQRLNHNYLGTEHILLGLLKLGQGVAVNVLRNLGIDFDTARQEVERLIGYGPEIQVYGDPA LTGRVKKSFESANEEASLLEHNYVGTEHLLLGILHQSDSVALQVLENLHIDPREVRKEILKELETFNLQLPPSSSSSSSS SRSNPSSSKSPLGHSLGSDKNEKLSALKAYGYDLTEMVRESKLDPVIGRSSEVERLILILCRRRKNNPVLIGEAGVGKTA IVEGLAQKIILNEVPDALRKKRLITLDLALMIAGTKYRGQFEERIKAVMDEVRKHGNILLFIDELHTIVGAGAAEGAIDA SNILKPALARGEIQCIGATTIDEYRKHIEKDAALERRFQKIVVHPPSVDETIEILRGLKKKYEEHHNVFITEEALKAAAT LSDQYVHGRFLPDKAIDLLDEAGARVRVNTMGQPTDLMKLEAEIENTKLAKEQAIGTQEYEKAAGLRDEEKKLRERLQSM KQEWENHKEEHQVPVDEEAVAQVVSLQTGIPSARLTEAESEKLLKLEDTLRRKVIGQNDAVTSICRAIRRSRTGIKDPNR PTGSFLFLGPTGVGKSLLAQQIAIEMFGGEDALIQVDMSEYMEKFAATKMMGSPPGYVGHEEGGHLTEQVRRRPYCVVLF DEIEKAHPDIMDLMLQILEQGRLTDSFGRKVDFRHAIIIMTSNLGADLIRKSGEIGFGLKSHMDYKVIQEKIEHAMKKHL KPEFINRLDESVIFRPLEKESLSEIIHLEINKLDSRLKNYQMALNIPDSVISFLVTKGHSPEMGARPLRRVIEQYLEDPL AELLLKESCRQEARKLRATLVENRVAFEREEEEQEAALPSPHLES |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | NP_876727.1 | class III stress response-related ATPase | VFG0079 | Protein | 0.0 | 51 |
| clpC | NP_876727.1 | class III stress response-related ATPase | VFG0080 | Protein | 1e-143 | 50 |
