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Name : clpA (Pro1107) Accession : NP_875499.1 Strain : Prochlorococcus marinus CCMP1375 Genome accession: NC_005042 Putative virulence/resistance : Virulence Product : Clp protease ATP-binding subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1032758 - 1035328 bp Length : 2571 bp Strand : + Note : - DNA sequence : ATGTTTGAAAGGTTTACCGAAAAAGCCATCAAGGTGATCATGTTGGCCCAAGAGGAGGCTAGAAGACTTGGTCACAATTT TGTTGGAACCGAACAAATACTCCTGGGATTAATAGGAGAGGGGACTGGAGTTGCAGCAAAGGTTTTAAAATCAATGGGAG TTAATTTAAAAGATTCCAGAGTAGAAGTTGAAAAAATAATTGGTCGTGGATCTGGCTTTGTTGCTGTAGAAATACCTTTT ACACCTCGTGCGAAAAGAGTCCTAGAGCTTTCTTTAGAAGAAGCTCGACAACTTGGACACAATTACATTGGAACGGAGCA TCTTCTACTTGGGCTAATTAGAGAAGGGGAAGGAGTAGCAGCAAGAGTTCTTGAAAATCTTGGAGTTGACCTTACAAAAG TAAGAACACAGGTAATTAGAATGCTTGGCGAAACAGCAGAAGTTTCAGCAGGCGGAGGATCAGGCAAAGGTTCAATAAAA ACAGCAACACTCGACGAATTTGGTACAAATCTCACTAAATTAGCAAGCGAATCTAAACTTGATCCTGTCGTTGGTCGCCA TGATGAGATAGATAGGGTTATACAAATACTCGGAAGAAGAACAAAAAACAATCCAGTACTTATTGGAGAGCCTGGGGTAG GTAAAACAGCTATTGCGGAAGGATTAGCTCAACGCATTCAACAAGGCGATATACCAGATATTTTGGAAGAGAAGCGAGTG TTAACTCTTGATATAGGTTTACTTGTAGCAGGAACTAAATACCGTGGGGAATTCGAAGAAAGATTAAAAAAAATAATGGA AGAAATAAAATCAGCCGGCAATGTAATTTTGGTTATCGATGAAGTTCATACTTTAATAGGTGCGGGGGCCGCTGAAGGTG CAATTGATGCAGCAAATATTCTTAAGCCTGCATTAGCAAGAGGTGAACTTCAATGCATAGGTGCAACTACTCTTGATGAA TATAGAAAACATATAGAAAGAGACGCCGCTCTAGAAAGACGCTTTCAACCGGTTATGATTGGCGAGCCTTCAATAGAAGA CACAATCGAAATACTGAAGGGCCTAAGAGAACGTTACGAACAACATCACAGATTAAAAATTACTGATGAAGCCTTAAATG CGGCTGCAAATCTTGGTGACAGATATATTTCCGATAGATTTCTTCCAGACAAAGCAATAGATCTAATAGATGAAGCTGGA AGTAGAGTTAGACTTCTTAATTCTAAATTACCTCCAGAAGCAAAACAAGTTGACAAGGAATTAAGAAAAGTACAAAAAGA AAAAGAAGAAGCTGTAAGAGATCAAGATTTCACAAAAGCAGGAGAGCTTAGAGAAAAAGAAGTTGAACTAAGAGATAAAA TAAGATCTATTCTAGATAATTCAAAACAAGATTCATCTAACTCTAAAAATGATTCTGAAGATGTAGCGTTAGTAAAAAAT GATGAATCAAAGAATGAAATTAATAATTCAACCAAAGAAGAAATTAATCAAACCATGCCTATGGTGAATGAAGAAGATAT AGCTCATATAGTTGCCTCTTGGACTGGTGTGCCGGTTCAGAAATTAACAGAAAGTGAGTCCGTCAAACTGCTAAATATGG AAGATACATTGCACCAAAGACTAATAGGCCAAGATGAAGCTGTTAAATCAGTATCAAAAGCAATAAGAAGAGCACGAGTT GGTCTTAAAAACCCAAACAGACCTATTGCTAGTTTCATATTCTCAGGACCTACAGGAGTAGGAAAAACAGAATTAACCAA AGCATTGGCAGCCTATTTCTTTGGCAGTGAAGAAGCCATGATAAGGCTAGACATGTCAGAGTTTATGGAAAGACATACTG TTAGTAAATTAATAGGATCCCCTCCTGGATATGTTGGTTTCAATGAAGGAGGACAACTTACAGAGGCTGTTAGAAGAAGG CCATATACAGTTGTACTTTTTGATGAAATAGAAAAAGCTCATCCAGATGTCTTTAATCTACTTCTACAGTTACTAGAAGA AGGCAGACTAACAGATTCGAAAGGTAGAACAGTAGATTTTAAAAATACACTTATAATAATGACTTCAAATATCGGCTCAA AAGTTATAGAAAAAGGTGGTGGCGGTTTAGGGTTTGAAATGGCCGGAGAGAGCGTTGAGGATAGTCAATATAATAGAATT AAATCTCTAGTAAATGAAGAGCTTAAGCAATACTTTAGACCTGAGTTTCTAAATAGATTGGATGAAATAATTGTCTTCAG ACAATTAACCCGAATGGAAGTAAAAGATATTGCAGAAATAATGTTAAAAGAAGTCTTCTCAAGAATAAAAGATAAAGGTA TTACCTTATCAGTATCTGAAGCATTTAAAGAAAGGTTAGTCGAAGAAGGATATAACCCTTCCTATGGTGCAAGGCCTCTT CGACGAGCAGTAATGAGACTTCTGGAAGATAGTCTTGCTGAAGAGGTTCTTTCAGGGAAGATCAAAGATGGTGATCAAGC AGAAGTAGATATTGATGAGAATAAGAATGTAATTGTAAAGCATATAGACAAGAATTCTAATAAGCCAGAACTTGCAACAG CAGGTATATAA Protein sequence : MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDSRVEVEKIIGRGSGFVAVEIPF TPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLTKVRTQVIRMLGETAEVSAGGGSGKGSIK TATLDEFGTNLTKLASESKLDPVVGRHDEIDRVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIQQGDIPDILEEKRV LTLDIGLLVAGTKYRGEFEERLKKIMEEIKSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDE YRKHIERDAALERRFQPVMIGEPSIEDTIEILKGLRERYEQHHRLKITDEALNAAANLGDRYISDRFLPDKAIDLIDEAG SRVRLLNSKLPPEAKQVDKELRKVQKEKEEAVRDQDFTKAGELREKEVELRDKIRSILDNSKQDSSNSKNDSEDVALVKN DESKNEINNSTKEEINQTMPMVNEEDIAHIVASWTGVPVQKLTESESVKLLNMEDTLHQRLIGQDEAVKSVSKAIRRARV GLKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGFNEGGQLTEAVRRR PYTVVLFDEIEKAHPDVFNLLLQLLEEGRLTDSKGRTVDFKNTLIIMTSNIGSKVIEKGGGGLGFEMAGESVEDSQYNRI KSLVNEELKQYFRPEFLNRLDEIIVFRQLTRMEVKDIAEIMLKEVFSRIKDKGITLSVSEAFKERLVEEGYNPSYGARPL RRAVMRLLEDSLAEEVLSGKIKDGDQAEVDIDENKNVIVKHIDKNSNKPELATAGI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpA | NP_875499.1 | Clp protease ATP-binding subunit | VFG0079 | Protein | 0.0 | 57 |
| clpA | NP_875499.1 | Clp protease ATP-binding subunit | VFG0080 | Protein | 7e-145 | 49 |
