Gene Information

Name : znuB (Pro1058)
Accession : NP_875450.1
Strain : Prochlorococcus marinus CCMP1375
Genome accession: NC_005042
Putative virulence/resistance : Virulence
Product : Mn2+/Zn2+ ABC transporter permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 975619 - 976494 bp
Length : 876 bp
Strand : -
Note : -

DNA sequence : 
ATGAATGTGCTGAATCTCTTCATTACTTCATACCCTTATTCATTATTGGTAGATCCACTTGCGCATGATTTCATGAGAAG
GGCACTTGCTATTAGTGCTTTGGTTGGAGGTGTTTGTGGATTACTTTCTTGTTATATGACCCTTAAAGGTTGGGCCTTAA
TGGGTGATGCGGTATCACATGCCGTCATGCCAGGGGTTGTAGTTGCCTATGCTATTGGTATTCCCTTTTCAGTTGGAGCA
TTTGTTTTTGGAGTGGGTTCAGTAGCTTTAATTGGTTTTGTAAAACAAAAATCTAGAGTCAAAGAAGATACTGTAATTGG
CTTAGTTTTTACTGGTTTCTTTGCTTTGGGTTTAGTTTTAGTTTCTAAGATAAAAAGTAATATTGACTTAATGCATATTT
TATTTGGTAGTCCATTGGGTATATCAAATTCTGATGTCAATCAAACTGTCCTAATTTGTATAATCGTACTTGCTATATTA
CTAATATTTAGAAAAGATTTAATGCTTTATTGTTTTGATGCAAAACATGCTAGATCAATTGGTATTAATACAGTATTTCT
TCATTATCTATTACTATCAGTACTTTCATTGGCAGCTGTCGCAGGATTACAGACTGTAGGCATTATATTGGTAGTAGCAA
TGTTGATTACCCCAGGAGCAACAGCATATTTATTAACTGATCGTTTCGATAGAATGACTTTACTAGCTGTTATTAGCAGC
ATGATCTCTAGTTTGCTAGGAGTATATATAAGTTATTGGTCGGATATTGAAACTGGTGGCTCTATTGTACTTGTTCAGAC
TTTCATTTTCCTTTTGGCATTTCTTTTTGCTCCTAGGTATGGGATTTTAAAGATTAACAATTCAAATCCACATTAA

Protein sequence : 
MNVLNLFITSYPYSLLVDPLAHDFMRRALAISALVGGVCGLLSCYMTLKGWALMGDAVSHAVMPGVVVAYAIGIPFSVGA
FVFGVGSVALIGFVKQKSRVKEDTVIGLVFTGFFALGLVLVSKIKSNIDLMHILFGSPLGISNSDVNQTVLICIIVLAIL
LIFRKDLMLYCFDAKHARSIGINTVFLHYLLLSVLSLAAVAGLQTVGIILVVAMLITPGATAYLLTDRFDRMTLLAVISS
MISSLLGVYISYWSDIETGGSIVLVQTFIFLLAFLFAPRYGILKINNSNPH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC NP_461784.1 permease Virulence SPI-1 Protein 2e-47 48
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 2e-47 48
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 2e-47 48
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 2e-47 48
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-47 48
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 4e-44 47
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 2e-44 47
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 4e-44 47
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-44 47
sitD NP_461785.1 permease Virulence SPI-1 Protein 3e-44 47
EF0576 NP_814341.1 cation ABC transporter permease Not tested Not named Protein 1e-40 43
ef0094 AAM75297.1 EF0094 Not tested Not named Protein 7e-41 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
znuB NP_875450.1 Mn2+/Zn2+ ABC transporter permease BAC0442 Protein 9e-54 50
znuB NP_875450.1 Mn2+/Zn2+ ABC transporter permease BAC0351 Protein 1e-47 48
znuB NP_875450.1 Mn2+/Zn2+ ABC transporter permease BAC0441 Protein 6e-45 48
znuB NP_875450.1 Mn2+/Zn2+ ABC transporter permease BAC0352 Protein 1e-44 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
znuB NP_875450.1 Mn2+/Zn2+ ABC transporter permease VFG0527 Protein 1e-47 48
znuB NP_875450.1 Mn2+/Zn2+ ABC transporter permease VFG0528 Protein 1e-44 47