Gene Information

Name : RB13091 (RB13091)
Accession : NP_870856.1
Strain : Rhodopirellula baltica SH 1
Genome accession: NC_005027
Putative virulence/resistance : Unknown
Product : cobalamin synthesis protein CobW
Function : -
COG functional category : R : General function prediction only
COG ID : COG0523
EC number : -
Position : 7023639 - 7024934 bp
Length : 1296 bp
Strand : -
Note : PMID: 1655697 best DB hits: BLAST: pir:D82953; conserved hypothetical protein PA5535 [imported] -; E=1e-109 embl:CAC08207.1; (AJ278349) P44k protein [Rhodococcus sp. AJ270]; E=1e-101 pir:B69760; conserved hypothetical protein yciC - Bacillus subtilis; E=1

DNA sequence :
ATGAACCAAACCGATTCCAAAACGCCCCAAGCTGAACGTCTTCCTGTTACCGTGCTTTCCGGATTCCTCGGAGCCGGCAA
GACGACACTGCTCAACCACATCCTGATCAATCGAGACGGATTGCGAGTCGCGGTGATCGTCAACGACATGAGCGAAGTCA
ACATCGACGCGGCGCTGGTCAAATCGGGCGACGCGAATCTATCTCGCACCGAGGAACAGCTCGTCGAGATGTCCAACGGC
TGCATCTGCTGCACGCTTCGCGAAGACTTGCTCATCGAAGTTCGCCGATTGGCTCGCGATGGCCGCTTTGATTATCTGCT
GATCGAATCCACTGGTATCTCCGAACCGATGCCGGTCGCGGAAACCTTCACTTTCGAAGACGAAGAGGGTGATAGTCTGT
CGCTGGTCGCGGAACTGGACACGATGGTGACCGTGGTCGACGCGGGAAATTTCATGAAAGACTTCGGCTCCTGGGATGAT
CTCACCGACCGACGGTTGGGTTTGAGCGAAGAGGACACTCGCAACATTGTGGACTTGTTGGTCGATCAAGTTGAATTCGC
CAACGTCATCCTTGTCAACAAAACCGATTTGATCTCGCCGTATGAACTGGAGCAGCTCACACGGATTCTGCGTCAACTCA
ACGCTGAATCCAAAATTCTGACCACGACGGAAAGCCGTGTTGAGCTATCCGAAATCATGGGCACCGGGCTCTATTCTCTG
AGTGAAGCCGAGACGCAGCCAGGGTGGTTGGAGGTGCCTCGTGGGGAAGAGGAAACCGAGACCGAAGAATACGGCATCTC
GAATTTCGTTTATCGAGCCCATCGCCCATTCCATCCCAAGCGGTTGACGAACGCTCTGGATGCTGACATGGAAGAAGGCT
TGTTCACCGGAGTGCTTCGCAGCAAAGGATTGATGTGGATCGCGTCGCGTCACGACTGGGCCTACGACTGGTCACAAGCC
GGTTGCTCGATCCGCATGAACCCAGCCGGTTTCTGGTGGGCGGCCGCACCGGAAAACGAATGGCCGGATGATTCCGAGTC
CATTGCAGAGATTCGATCGAAATTCGTCGGCGAACACGGCGATCGCCATCAAGAATTGGTCTTCATCGGAAACGCGATGA
GCCAAGAACGAATTACCCAGATTCTCGATGACTGCTTGCTGACTGACATGGAGTTTGCTCAAGGCCCGGAAGCCTGGACG
AACATGGAAGATCCATTGCCGCCGATTGAACTGGAAACGGACCTCGACGAAATGCTCGCTTCAGATGAAGCAACTGCACA
TGAGGTTCTGCAGTGA

Protein sequence :
MNQTDSKTPQAERLPVTVLSGFLGAGKTTLLNHILINRDGLRVAVIVNDMSEVNIDAALVKSGDANLSRTEEQLVEMSNG
CICCTLREDLLIEVRRLARDGRFDYLLIESTGISEPMPVAETFTFEDEEGDSLSLVAELDTMVTVVDAGNFMKDFGSWDD
LTDRRLGLSEEDTRNIVDLLVDQVEFANVILVNKTDLISPYELEQLTRILRQLNAESKILTTTESRVELSEIMGTGLYSL
SEAETQPGWLEVPRGEEETETEEYGISNFVYRAHRPFHPKRLTNALDADMEEGLFTGVLRSKGLMWIASRHDWAYDWSQA
GCSIRMNPAGFWWAAAPENEWPDDSESIAEIRSKFVGEHGDRHQELVFIGNAMSQERITQILDDCLLTDMEFAQGPEAWT
NMEDPLPPIELETDLDEMLASDEATAHEVLQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0450 YP_039898.1 cobalamin synthesis protein Not tested vSa¥á Protein 5e-77 48
SAS0408 YP_042534.1 cobalamin synthesis protein Not tested vSa¥á Protein 3e-77 48